To cite package ‘crisprBwa’ in publications use: Hoberecht L, Perampalam P, Lun A, Fortin JP. A comprehensive Bioconductor ecosystem for the design of CRISPR guide RNAs across nucleases and technologies. Nature Communications. 2022 Nov 2;13(1):6568. A BibTeX entry for LaTeX users is @Article{, author = {Luke Hoberecht and Pirunthan Perampalam and Aaron Lun and Jean-Philippe Fortin}, title = {A comprehensive Bioconductor ecosystem for the design of CRISPR guide RNAs across nucleases and technologies}, journal = {Nature Communications}, volume = {13}, number = {1}, pages = {6568}, year = {2022}, } Li H, Durbin R. Fast and accurate short read alignment with Burrows–Wheeler transform. Bioinformatics. 2009 Jul 15;25(14):1754-60. A BibTeX entry for LaTeX users is @Article{, title = {Fast and accurate short read alignment with Burrows--Wheeler transform}, author = {{Li} and {Heng} and {Durbin} and {Richard}}, journal = {Bioinformatics}, volume = {25}, number = {14}, pages = {1754--1760}, year = {2009}, }