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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "consensusSeekeR" in publications use:'
type: software
license: Artistic-2.0
title: 'consensusSeekeR: Detection of consensus regions inside a group of experiences
  using genomic positions and genomic ranges'
version: 1.33.0
doi: 10.1515/sagmb-2014-0098
abstract: This package compares genomic positions and genomic ranges from multiple
  experiments to extract common regions. The size of the analyzed region is adjustable
  as well as the number of experiences in which a feature must be present in a potential
  region to tag this region as a consensus region. In genomic analysis where feature
  identification generates a position value surrounded by a genomic range, such as
  ChIP-Seq peaks and nucleosome positions, the replication of an experiment may result
  in slight differences between predicted values. This package enables the conciliation
  of the results into consensus regions.
authors:
- family-names: Deschênes
  given-names: Astrid
  email: adeschen@hotmail.com
  orcid: https://orcid.org/0000-0001-7846-6749
- family-names: Belleau
  given-names: Pascal
  email: pascal_belleau@hotmail.com
  orcid: https://orcid.org/0000-0002-0802-1071
- family-names: Droit
  given-names: Arnaud
  email: arnaud.droit@crchuq.ulaval.ca
preferred-citation:
  type: article
  title: Using informative Multinomial-Dirichlet prior in a t-mixture with reversible
    jump estimation of nucleosome positions for genome-wide profiling
  authors:
  - family-names: Samb
    given-names: Rawane
  - family-names: Khadraoui
    given-names: Khader
  - family-names: Belleau
    given-names: Pascal
    email: pascal_belleau@hotmail.com
    orcid: https://orcid.org/0000-0002-0802-1071
  - family-names: Desch\^enes
    given-names: Astrid
  - family-names: Lakhal-Chaieb
    given-names: Lajmi
  - family-names: Droit
    given-names: Arnaud
    email: arnaud.droit@crchuq.ulaval.ca
  year: '2015'
  journal: Statistical Applications in Genetics and Molecular Biology
  volume: '14'
  issue: '6'
  doi: 10.1515/sagmb-2014-0098
  url: http://www.degruyter.com/view/j/sagmb.2015.14.issue-6/sagmb-2014-0098/sagmb-2014-0098.xml
  start: '517'
  end: '532'
repository: https://bioc.r-universe.dev
repository-code: https://github.com/adeschen/consensusSeekeR
url: https://github.com/adeschen/consensusSeekeR
date-released: '2021-11-20'
contact:
- family-names: Deschênes
  given-names: Astrid
  email: adeschen@hotmail.com
  orcid: https://orcid.org/0000-0001-7846-6749