To cite cogeqc in publications, use:

  Almeida-Silva, F., & Van de Peer, Y. (2023). Assessing the quality of
  comparative genomics data and results with the cogeqc R/Bioconductor
  package. Methods in Ecology and Evolution, 14, 2942–2952.
  https://doi.org/10.1111/2041-210X.14243

A BibTeX entry for LaTeX users is

  @Article{,
    title = {Assessing the quality of comparative genomics data and results with the cogeqc R/Bioconductor package},
    author = {Fabricio Almeida-Silva and Yves {Van de Peer}},
    journal = {Methods in Ecology and Evolution},
    year = {2023},
    volume = {14},
    number = {12},
    pages = {2942-2952},
    url = {https://besjournals.onlinelibrary.wiley.com/doi/abs/10.1111/2041-210X.14243},
    doi = {10.1111/2041-210X.14243},
  }