Changes in version 1.15.2 (2024-04-03) o Add support for `Seurat` version 5 objects Changes in version 1.15.1 (2023-10-31) o Replace `Seurat` dependency with `SeuratObject` Changes in version 1.7.3 (2022-03-09) o `vec_out` option for directly getting classification results as a vector, to be inserted into other metadata/workflow o Maintainer change Changes in version 1.5.2 (2021-10-04) o `clustify_lists()` support for output of overlapping genes (`details_out = TRUE`) o Added truncated mean and trimean modes to `average_clusters()` Changes in version 1.5.1 (2021-08-04) o `clustify_lists()` support for uneven number of markers o Deprecated SeuratV2 support Changes in version 1.3.3 (2021-02-28) o Launch shiny app with `run_clustifyr_app()` o Plot and GO for most divergent ranks in correlation of query vs reference Changes in version 1.3.2 (2021-02-25) o `build_atlas()` for combining references o More Q&A Changes in version 1.3.1 (2020-12-26) o Q&A section o Now defaults to top 1000 variable genes in Seurat (including v4) o Bug fixes Changes in version 1.1.2 (2020-09-21) o USCS cell browser reference building o Tutorial update o Bug fixes Changes in version 1.1.0 (2020-05-21) o Bioc release o Bug fixes Changes in version 0.99.0 (2019-11-06) o Update to tutorials o Refactor arguments o Bug fixes o Cleanup for Bioconductor submission Changes in version 0.0.3 (2019-09-06) o Support of SingleCellExperiment objects and more o Bug fixes Changes in version 0.0.2 (2019-05-29) o Updated discussions, benchmark, and visualization example pages o Reorganized `clustifyrdata` data package Changes in version 0.0.1 (2019-02-01) o Added direct support for `seurat` and other object classes o Updated readme and tutorial pages o Moved some larger reference data to `clustifyrdata`