NEWS

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chimeraviz 1.13.9

CHANGES

• Fix bug in plot_fusion where the upstream ideogram was incorrect. Ref https://github.com/stianlagstad/chimeraviz/issues/83

chimeraviz 1.13.8

CHANGES

• Support Aeron. Ref https://github.com/stianlagstad/chimeraviz/pull/81

chimeraviz 1.13.7

CHANGES

• Support SQUID. Ref https://github.com/stianlagstad/chimeraviz/pull/79

chimeraviz 1.13.6

CHANGES

• Change in plot_circle: Allow for mitochondria. Ref https://github.com/stianlagstad/chimeraviz/issues/80 and https://github.com/stianlagstad/chimeraviz/issues/18. Thank you to Philip Lijnzaad.

chimeraviz 1.13.5

CHANGES

• Change in create_fusion_report: Create the report in the current working directory. Ref https://github.com/stianlagstad/chimeraviz/issues/66

chimeraviz 1.13.4

CHANGES

• Support ChimPipe. Ref https://github.com/stianlagstad/chimeraviz/pull/77

chimeraviz 1.9.5

CHANGES

• Allow calling plot_fusion without bam/bedfile. Ref https://github.com/stianlagstad/chimeraviz/issues/61

chimeraviz 1.9.1

CHANGES

• Fixed a bug in plot_circle where link widths were off. Ref https://github.com/stianlagstad/chimeraviz/issues/52

chimeraviz 1.7.1

CHANGES

• Introduced support for oncofuse. Ref https://github.com/stianlagstad/chimeraviz/issues/47 and https://github.com/stianlagstad/chimeraviz/pull/48/files.

chimeraviz 1.5.6

CHANGES

• The interface for working with chimeraviz has changed to comply with https://github.com/jimhester/lintr. chimeraviz is the same as before, but methods have new names.

chimeraviz 1.5.1

NEW FEATURES

• Added support for the mm10 genome.

chimeraviz 1.2.3

NEW FEATURES

• Added the protein domain plot to show which protein domains are retained in the fusion.

BUG FIXES

• Fixed a bug in plotFusionReads where too many supporting reads would lead to an error.