NEWS
cellxgenedp 1.13
BUG FIXES
- (v. 1.12.1 / 1.13.1) Do not attempt to 'unlist' any facet column in
datasets or collections
cellxgenedp 1.10
SIGNIFICANT USER-VISIBLE CHANGES
- (v.1.9.1) Add progress bar when updated
db()
cellxgenedp 1.8
SIGNIFICANT USER-VISIBLE CHANGES
-
(v 1.7.2) Add vignette 'Case studies', include identifying dataset
authors and using ontolgies to identify datasets
-
(v 1.7.1) Update vignette section on dataset visualization to
BUG FIXES
- (v 1.7.3) Use all collections, datasets, files to determine
available columns
cellxgenedp 1.6
SIGNIFICANT USER-VISIBLE CHANGES
- (v 1.6.1) Update vignette section on dataset visualization to
accomodate changes in the 'Discover' API.
https://github.com/mtmorgan/cellxgenedp/issues/15
- (v 1.5.2) use CELLxGENE 'Discover' API, changing column names of
some return values. See 'API changes' of the 'Discover and download
datasets...' vignette.
BUG FIXES
- (v 1.6.2) Use all collections, datasets, and files when
identifying available columns.
cellxgenedp 1.4
SIGNIFICANT USER-VISIBLE CHANGES
- (v 1.3.3) add publisher_metadata(), authors(), and links() to make access
to nested 'collections()' data more straight-forward
cellxgenedp 1.2
SIGNIFICANT USER-VISIBLE CHANGES
-
(v. 1.1.4) allow custom files_download() cache. Thanks @stemangiola,
https://github.com/mtmorgan/cellxgenedp/pull/9
-
(v. 1.1.6) datasets ethnicity field renamed to
self_reported_ethnicity
-
(v. 1.1.7) use zellkonverter's basilisk-based Python parser to read
H5AD files in the vignette, see
https://github.com/theislab/zellkonverter/issues/78
OTHER
-
(v. 1.1.2) reset cache on build machines weekly
-
(v. 1.1.6) use {rjsoncons} CRAN package for queries, rather than
local implementation. Thanks @LiNk-NY,
https://github.com/mtmorgan/cellxgenedp/pull/12
cellxgenedp 0.0.7
- (v. 0.0.7) make errors during local cache update more accessible;
see https://github.com/mtmorgan/cellxgenedp/issues/1