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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "cellscape" in publications use:'
type: software
license: GPL-3.0-only
title: 'cellscape: Explores single cell copy number profiles in the context of a single
  cell tree'
version: 1.29.0
abstract: 'CellScape facilitates interactive browsing of single cell clonal evolution
  datasets. The tool requires two main inputs: (i) the genomic content of each single
  cell in the form of either copy number segments or targeted mutation values, and
  (ii) a single cell phylogeny. Phylogenetic formats can vary from dendrogram-like
  phylogenies with leaf nodes to evolutionary model-derived phylogenies with observed
  or latent internal nodes. The CellScape phylogeny is flexibly input as a table of
  source-target edges to support arbitrary representations, where each node may or
  may not have associated genomic data. The output of CellScape is an interactive
  interface displaying a single cell phylogeny and a cell-by-locus genomic heatmap
  representing the mutation status in each cell for each locus.'
authors:
- family-names: Wang
  given-names: Shixiang
  email: w_shixiang@163.com
  orcid: https://orcid.org/0000-0001-9855-7357
- family-names: Smith
  given-names: Maia
  email: maiaannesmith@gmail.com
repository: https://bioc.r-universe.dev
contact:
- family-names: Wang
  given-names: Shixiang
  email: w_shixiang@163.com
  orcid: https://orcid.org/0000-0001-9855-7357