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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "ccfindR" in publications use:'
type: software
license: GPL-2.0-or-later
title: 'ccfindR: Cancer Clone Finder'
version: 1.25.0
doi: 10.32614/CRAN.package.ccfindR
abstract: A collection of tools for cancer genomic data clustering analyses, including
  those for single cell RNA-seq. Cell clustering and feature gene selection analysis
  employ Bayesian (and maximum likelihood) non-negative matrix factorization (NMF)
  algorithm. Input data set consists of RNA count matrix, gene, and cell bar code
  annotations. Analysis outputs are factor matrices for multiple ranks and marginal
  likelihood values for each rank. The package includes utilities for downstream analyses,
  including meta-gene identification, visualization, and construction of rank-based
  trees for clusters.
authors:
- family-names: Woo
  given-names: Jun
  email: jwoo@umn.edu
- family-names: Wang
  given-names: Jinhua
  email: wangjh@umn.edu
repository: https://bioc.r-universe.dev
commit: c0ae7f1f8433521a79bb705ad71509e020a2175d
url: http://dx.doi.org/10.26508/lsa.201900443
date-released: '2019-10-01'
contact:
- family-names: Woo
  given-names: Jun
  email: jwoo@umn.edu