Package: calm
Type: Package
Title: Covariate Assisted Large-scale Multiple testing
Version: 1.27.0
Description: Statistical methods for multiple testing with covariate
        information. Traditional multiple testing methods only consider
        a list of test statistics, such as p-values. Our methods
        incorporate the auxiliary information, such as the lengths of
        gene coding regions or the minor allele frequencies of SNPs, to
        improve power.
Authors@R: person("Kun", "Liang", email = "kun.liang@uwaterloo.ca", role = c("aut", "cre"))
License: GPL (>=2)
Encoding: UTF-8
LazyData: false
Imports: mgcv, stats, graphics
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
biocViews: Bayesian, DifferentialExpression, GeneExpression,
        Regression, Microarray, Sequencing, RNASeq, MultipleComparison,
        Genetics, ImmunoOncology, Metabolomics, Proteomics,
        Transcriptomics
RoxygenNote: 6.1.1
BugReports: https://github.com/k22liang/calm/issues
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:50:49 UTC
RemoteUrl: https://github.com/bioc/calm
RemoteRef: HEAD
RemoteSha: db7e7856e76b3db544a8de31521c0011006924a1
NeedsCompilation: no
Packaged: 2026-07-04 14:49:28 UTC; root
Author: Kun Liang [aut, cre]
Maintainer: Kun Liang <kun.liang@uwaterloo.ca>