To cite cageminer in publications use:

  Almeida-Silva, F., & Venancio, T. M. (2022). cageminer: an
  R/Bioconductor package to prioritize candidate genes by integrating
  genome-wide association studies and gene coexpression networks. in
  silico Plants, 4(2), diac018.
  https://doi.org/10.1093/insilicoplants/diac018

A BibTeX entry for LaTeX users is

  @Article{,
    title = {cageminer: an R/Bioconductor package to prioritize candidate genes by integrating genome-wide association studies and gene coexpression networks},
    author = {Fabricio Almeida-Silva and Thiago M. Venancio},
    journal = {in silico Plants},
    year = {2022},
    volume = {4},
    number = {2},
    pages = {diac018},
    url = {https://doi.org/10.1093/insilicoplants/diac018},
    doi = {10.1093/insilicoplants/diac018},
  }