Jaffe AE, Murakami P, Lee H, Leek JT, Fallin DM, Feinberg AP, Irizarry
RA (2012). “Bump hunting to identify differentially methylated regions
in epigenetic epidemiology studies.” _International journal of
epidemiology_, *41*(1), 200-209. doi:10.1093/ije/dyr238
<https://doi.org/10.1093/ije/dyr238>.

A BibTeX entry for LaTeX users is

  @Article{bumphunter,
    author = {Andrew E. Jaffe and Peter Murakami and Hwajin Lee and Jeffrey T. Leek and Daniele M. Fallin and Andrew P. Feinberg and Rafael A. Irizarry},
    title = {Bump hunting to identify differentially methylated regions in epigenetic epidemiology studies},
    journal = {International journal of epidemiology},
    year = {2012},
    volume = {41},
    number = {1},
    pages = {200--209},
    doi = {10.1093/ije/dyr238},
    pubmed = {22422453},
  }

More details are given in:

  Aryee MJ, Jaffe AE, Corrada-Bravo H, Ladd-Acosta C, Feinberg AP,
  Hansen KD, Irizarry RA (2014). “Minfi: A flexible and comprehensive
  Bioconductor package for the analysis of Infinium DNA Methylation
  microarrays.” _Bioinformatics_, *30*(10), 1363-1369.
  doi:10.1093/bioinformatics/btu049
  <https://doi.org/10.1093/bioinformatics/btu049>.

A BibTeX entry for LaTeX users is

  @Article{minfi,
    title = {Minfi: A flexible and comprehensive Bioconductor package for the analysis of Infinium DNA Methylation microarrays},
    author = {Martin J. Aryee and Andrew E. Jaffe and Hector Corrada-Bravo and Christine Ladd-Acosta and Andrew P. Feinberg and Kasper D. Hansen and Rafael A. Irizarry},
    year = {2014},
    journal = {Bioinformatics},
    volume = {30},
    number = {10},
    pages = {1363--1369},
    doi = {10.1093/bioinformatics/btu049},
    pubmed = {24478339},
  }