NEWS
biomformat 0.3.13
USER-VISIBLE CHANGES
- Added make_biom function. Creates biom object from standard R data table(s).
biomformat 0.3.12
USER-VISIBLE CHANGES
- No user-visible changes. All future compatibility changes.
BUG FIXES
- Unit test changes to work with upcoming R release and new testthat version.
- This solves Issue 4: https://github.com/joey711/biom/issues/4
biomformat 0.3.11
USER-VISIBLE CHANGES
- No user-visible changes. All future CRAN compatibility changes.
BUG FIXES
- Clarified license and project in the README.md
- Added TODO.html, README.html, and TODO.md to .Rbuildignore (requested by CRAN)
- Moved 'biom-demo.Rmd' to 'vignettes/'
- Updated 'inst/NEWS' (this) file to official format
- Removed pre-built vignette HTML so that it is re-built during package build.
This updates things like the build-date in the vignette, but also ensures that
the user sees in the vignette the results of code that just worked with their
copy of the package.
biomformat 0.3.10
USER-VISIBLE CHANGES
- These changes should not affect any package behavior.
- Some of the top-level documentation has been changed to reflect new development
location on GitHub.
BUG FIXES
- Minor fixes for CRAN compatibility
- This addresses Issue 1: https://github.com/joey711/biom/issues/1
biomformat 0.3.9
SIGNIFICANT USER-VISIBLE CHANGES
- speed improvement for sparse matrices
NEW FEATURES
- The 'biom_data' parsing function now uses a vectorized (matrix-indexed)
assignment while parsing sparse matrices.
- Unofficial benchmarks estimate a few 100X speedup.
biomformat 0.3.8
SIGNIFICANT USER-VISIBLE CHANGES
- First release version released on CRAN