Package: beadarray
Title: Quality assessment and low-level analysis for Illumina BeadArray
        data
Version: 2.63.4
Date: 2026-08-31
Author: Mark Dunning, Mike Smith, Jonathan Cairns, Andy Lynch, Matt
        Ritchie
Maintainer: Mark Dunning <m.dunning@imperial.ac.uk>
Description: The package is able to read bead-level data (raw TIFFs and
        text files) output by BeadScan as well as bead-summary data
        from BeadStudio. Methods for quality assessment and low-level
        analysis are provided.
Depends: R (>= 3.5.0), BiocGenerics (>= 0.3.2), Biobase (>= 2.17.8),
        hexbin
Imports: limma, AnnotationDbi, stats4, reshape2, GenomicRanges,
        IRanges, methods, ggplot2, BeadDataPackR
Suggests: lumi, vsn, affy, hwriter, beadarrayExampleData,
        illuminaHumanv3.db, gridExtra, BiocStyle,
        TxDb.Hsapiens.UCSC.hg19.knownGene, ggbio, knitr
License: MIT + file LICENSE
biocViews: Microarray, OneChannel, QualityControl, Preprocessing
LazyData: yes
VignetteBuilder: knitr
Config/pak/sysreqs: libicu-dev libpng-dev libssl-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-08-31 16:26:27 UTC
RemoteUrl: https://github.com/bioc/beadarray
RemoteRef: HEAD
RemoteSha: a5c47373b82a5f945996a60a95f7d4eb4a0d4082
NeedsCompilation: yes
Packaged: 2026-10-01 07:42:27 UTC; root