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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "batchCorr" in publications use:'
type: software
license: GPL-2.0-only
title: 'batchCorr: Within And Between Batch Correction Of LC-MS Metabolomics Data'
version: 1.3.0
doi: 10.1007/s11306-016-1124-4
identifiers:
- type: doi
  value: 10.32614/CRAN.package.batchCorr
- type: doi
  value: 10.3390/metabo10040135
abstract: From the perspective of metabolites as the continuation of the central dogma
  of biology, metabolomics provides the closest link to many phenotypes of interest.
  This makes metabolomics research promising in teasing apart the complexities of
  living systems. However, due to experimental reasons, the data includes non-biological
  variation which limits quality and reproducibility, especially if the data is obtained
  from several batches. The batchCorr package reduces unwanted variation by way of
  between-batch alignment, within-batch drift correction and between-batch normalization
  using batch-specific quality control samples and long-term reference QC samples.
  Please see the associated article for more thorough descriptions of algorithms.
authors:
- family-names: Ribbenstedt
  given-names: Anton
  email: parasitetwin@gmail.com
  orcid: https://orcid.org/0000-0002-9985-5644
- family-names: Brunius
  given-names: Carl
  email: carl.brunius@chalmers.se
  orcid: https://orcid.org/0000-0003-3957-870X
- family-names: Suksi
  given-names: Vilhelm
preferred-citation:
  type: article
  title: Large-scale untargeted LC-MS metabolomics data correction using between-batch
    feature alignment and cluster-based within-batch signal intensity drift correction
  authors:
  - family-names: Brunius
    given-names: Carl
    email: carl.brunius@chalmers.se
    orcid: https://orcid.org/0000-0003-3957-870X
  - family-names: Shi
    given-names: Lin
  - family-names: Landberg
    given-names: Rikard
  year: '2020'
  journal: Metabolites
  volume: '10'
  issue: '135'
  url: https://doi.org/10.3390/metabo10040135
  doi: 10.1007/s11306-016-1124-4
  identifiers:
  - type: doi
    value: 10.3390/metabo10040135
repository: https://bioc.r-universe.dev
repository-code: https://github.com/MetaboComp/batchCorr
commit: 7e4bfeb89df7bb83cbd71205ddc81262b3c5a250
url: https://github.com/MetaboComp/batchCorr
date-released: '2020-05-29'
contact:
- family-names: Ribbenstedt
  given-names: Anton
  email: parasitetwin@gmail.com
  orcid: https://orcid.org/0000-0002-9985-5644