NEWS
barmixR 0.99.3
Bug fixes
- Updated Stan models to the new array syntax (
array[] int etc.),
fixing build and install failures with recent Stan compilers.
- Renamed the internal Dirichlet-multinomial functions in the barcode
model to
barmix_dm_lpmf()/barmix_dm_rng() to avoid a name clash
with the built-in dirichlet_multinomial added in Stan 2.34. Results
are unchanged.
barmixR 0.99.0
New features
- Initial Bioconductor submission.
- Bayesian framework for barcode mixture modeling.
- Joint modeling of barcode composition and population size.
- Posterior predictive diagnostics for barcode composition and population size.
- Estimation of quantitative treatment resistance (QTR).