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# CITATION file created with {cffr} R package
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cff-version: 1.2.0
message: 'To cite package "augere.de" in publications use:'
type: software
license: MIT
title: 'augere.de: Automatic Generation of Differential Expression Analyses'
version: 0.99.2
doi: 10.32614/CRAN.package.augere.de
abstract: Implements pipelines for generating differential expression analysis reports
  in the augere framework. This includes analyses with edgeR or voom-limma, with a
  variety of options for contrasts, blocking and covariates. Each pipeline function
  generates a self-contained Rmarkdown report with all of the steps required to reproduce
  the DE analysis.
authors:
- family-names: Lun
  given-names: Aaron
  email: infinite.monkeys.with.keyboards@gmail.com
  orcid: https://orcid.org/0000-0002-3564-4813
repository: https://bioc.r-universe.dev
repository-code: https://github.com/augere-bioinfo/augere.de
commit: 9c39bb43f273502229031d890db102cf306b972b
url: https://github.com/augere-bioinfo/augere.de
date-released: '2026-04-11'
contact:
- family-names: Lun
  given-names: Aaron
  email: infinite.monkeys.with.keyboards@gmail.com
  orcid: https://orcid.org/0000-0002-3564-4813