Package: aracne.networks
Type: Package
Title: ARACNe-inferred gene networks from TCGA tumor datasets
Version: 1.39.1
Authors@R: c(
    person("Federico M.", "Giorgi", email = "federico.giorgi@gmail.com",
        role = c("aut", "cre"), comment = c(ORCID = "0000-0002-7325-9908")),
    person("Mariano J.", "Alvarez", email = "reef103@gmail.com",
        role = "aut"))
Description: This package provides access to ARACNe-inferred gene
        regulatory networks (regulons) from TCGA tumor datasets. The
        networks are hosted on Zenodo, downloaded on demand and cached
        locally with BiocFileCache. The package also contains a
        function to export them into plain-text format.
License: file LICENSE
URL: https://github.com/federicogiorgi/aracne.networks
BugReports: https://github.com/federicogiorgi/aracne.networks/issues
biocViews: ExperimentData, Genome, Homo_sapiens_Data, CancerData
NeedsCompilation: no
Depends: R (>= 4.0), viper
Imports: BiocFileCache, tools, utils
Suggests: BiocStyle, knitr, rmarkdown, testthat
VignetteBuilder: knitr
Encoding: UTF-8
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev libssl-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-09-23 13:51:57 UTC
RemoteUrl: https://github.com/bioc/aracne.networks
RemoteRef: HEAD
RemoteSha: d000659130672ee12ffa5a287616ffe16c334eb2
Packaged: 2026-10-10 10:37:40 UTC; root
Author: Federico M. Giorgi [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-7325-9908>),
  Mariano J. Alvarez [aut]
Maintainer: Federico M. Giorgi <federico.giorgi@gmail.com>