{ "_id": "6aca1416fe5cc25786e846ab", "Package": "yeastCC", "Version": "1.53.0", "Title": "Spellman et al. (1998) and Pramila/Breeden (2006) yeast cell\ncycle microarray data", "Author": "Sandrine Dudoit ", "Maintainer": "Sandrine Dudoit ", "Description": "ExpressionSet for Spellman et al. (1998) yeast cell cycle\nmicroarray experiment", "License": "Artistic-2.0", "LazyData": "yes", "biocViews": "ExperimentData, CellCulture, Saccharomyces_cerevisiae_Data,\nCancerData, MicroarrayData, OneChannelData, GEO", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:22:19 UTC", "RemoteUrl": "https://github.com/bioc/yeastCC", "RemoteRef": "HEAD", "RemoteSha": "65a77f0410b3619252288a5d58d4529b53834c10", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-10 10:28:01 UTC", "User": "root" }, "_user": "bioc", "_type": "src", "_file": "yeastCC_1.53.0.tar.gz", "_fileid": "https://r2.ropensci.org/7392897160e6a0e1e06f82c2eb05036b63323cdd7f69e013faf5c25fbc5d39d5", "_filesize": 4608726, "_sha256": "7392897160e6a0e1e06f82c2eb05036b63323cdd7f69e013faf5c25fbc5d39d5", "_expires": "2027-01-18T10:31:46.000Z", "_created": "2026-10-10T10:28:01.000Z", "_published": "2026-10-10T10:31:49.488Z", "_buildurl": "https://github.com/r-universe/bioc/actions/runs/38044826567", "_status": "success", "_host": "GitHub-Actions", "_bioccheck": { "error": 2, "warning": 2, "note": 9 }, "_upstream": "https://github.com/bioc/yeastCC", "_commit": { "id": "65a77f0410b3619252288a5d58d4529b53834c10", "author": "lshep ", "committer": "lshep ", "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n", "time": 1777378939 }, "_maintainer": { "name": "Sandrine Dudoit", "email": "sandrine@stat.berkeley.edu", "login": "sandrinedudoit", "orcid": "0000-0002-6069-8629", "description": "Professor of Statistics and Biostatistics\nUniversity of California, Berkeley", "uuid": 6926607 }, "_distro": "resolute", "_jobs": [ { "job": 114192687612, "time": 101, "config": "bioc-checks", "r": "4.6.1", "check": "ERROR", "artifact": "11667192892" }, { "job": 114192687735, "time": 168, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "11666647752" }, { "job": 114192687643, "time": 181, "config": "linux-release-x86_64", "r": "4.6.1", "check": "WARNING", "artifact": "11667193037" }, { "job": 114192189133, "time": 176, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11666997111" } ], "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 2.10", "role": "Depends" }, { "package": "Biobase", "version": ">= 2.5.5", "role": "Depends" } ], "_owner": "bioc", "_selfowned": true, "_usedby": 2, "_updates": [ { "week": "2025-44", "n": 2 }, { "week": "2026-18", "n": 2 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.53.0", "bioc": "3.24", "repository": "data/experiment" }, { "branch": "release", "version": "1.52.0", "bioc": "3.23", "repository": "data/experiment" } ], "_topics": [ "experimentdata", "cellculture", "saccharomyces_cerevisiae_data", "cancerdata", "microarraydata", "onechanneldata", "geo", "datapkg" ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "followers": 476, "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_searchresults": 50, "_datapkg": true, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/yeastCC.html" ], "_cranurl": false, "_exports": [], "_datasets": [ { "name": "breeden", "title": "Breeden et al. yeast cell cycle experiment", "object": "breeden", "class": [ "ExpressionSet" ], "fields": [], "table": false, "tojson": false }, { "name": "orf800", "title": "Cell cycle regulated genes from Spellman et al. (1998)", "object": "orf800", "class": [ "character" ], "fields": [], "table": false, "tojson": true }, { "name": "spYCCES", "title": "Data from the Spellman et al. (1998) yeast cell cycle microarray experiment", "object": "spYCCES", "class": [ "ExpressionSet" ], "fields": [], "table": false, "tojson": false }, { "name": "spYCCmeta", "title": "metadata on yeast cell cycle microarray experiment", "object": "spYCCmeta", "class": [ "data.frame" ], "fields": [ "Process", "Function", "X", "Peak", "Phase.Order", "Cluster.Order", "ORF", "YPD", "SGD", "YPD.1", "SGD.1", "MIPS", "n1", "n2", "Geomean", "Absolute", "g1", "g2", "Geomean.1", "Absolute.1", "Deletion", "Known.", "Description", "Aggregate.Score", "Phase", "No..Elements", "Most.Relevant.Promoter.Elements", "X.1", "X.2", "X.3", "X.4", "X.5", "X.6", "X.7", "Number", "SCB", "SCB.1", "SCB.2", "SCB.3", "X.8", "Number.1", "SCB_d", "SCB_d.1", "SCB_d.2", "SCB_d.3", "Number.2", "MCB", "MCB.1", "MCB.2", "MCB.3", "Number.3", "MCB_d", "MCB_d.1", "MCB_d.2", "MCB_d.3", "X.9", "Number.4", "SFF", "Number.5", "Swi5", "Swi5.1", "Swi5.2", "Swi5.3", "Number.6", "Swi5e", "Swi5e.1", "Swi5e.2", "Swi5e.3", "Number.7", "ECB", "Number.8", "STE12", "MIG1.sites", "X.10", "X.11" ], "rows": 800, "table": true, "tojson": true }, { "name": "yeastCC", "title": "Data from the Spellman et al. (1998) yeast cell cycle microarray experiment", "object": "yeastCC", "class": [ "ExpressionSet" ], "fields": [], "table": false, "tojson": false } ], "_help": [ { "page": "breeden", "title": "Breeden et al. yeast cell cycle experiment", "topics": [ "breeden" ] }, { "page": "orf800", "title": "Cell cycle regulated genes from Spellman et al. (1998)", "topics": [ "orf800" ] }, { "page": "spYCCmeta", "title": "metadata on yeast cell cycle microarray experiment", "topics": [ "spYCCmeta" ] }, { "page": "yeastCC", "title": "Data from the Spellman et al. (1998) yeast cell cycle microarray experiment", "topics": [ "spYCCES", "yeastCC" ] } ], "_rundeps": [ "Biobase", "BiocGenerics", "generics" ], "_score": 3.778151250383644, "_indexed": true, "_nocasepkg": "yeastcc", "_universes": [ "bioc", "sandrinedudoit" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.53.0", "date": "2026-10-10T10:31:01.000Z", "distro": "resolute", "commit": "65a77f0410b3619252288a5d58d4529b53834c10", "fileid": "https://r2.ropensci.org/9ca443af9bf911d27da6a1beabb5cb144f0888aef321d887feb0456156e1d18f", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/bioc/actions/runs/38044826567" }, { "r": "4.6.1", "os": "linux", "version": "1.53.0", "date": "2026-10-10T10:31:18.000Z", "distro": "resolute", "commit": "65a77f0410b3619252288a5d58d4529b53834c10", "fileid": "https://r2.ropensci.org/224e86115c6855616af51f148ec632d43d7fbfe6515267676b5c943d7b995a4b", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/bioc/actions/runs/38044826567" } ] }