{ "_id": "6a1bcfe91d7bb097a0a140ee", "Package": "systemPipeTools", "Title": "Tools for data visualization", "Version": "1.21.0", "Date": "2021-05-11", "Authors@R": "c(\nperson(given = \"Daniela\", family = \"Cassol\", role = c(\"aut\", \"cre\"), email = \"danicassol@gmail.com\"),\nperson(given = \"Ponmathi\", family = \"Ramasamy\", role = c(\"aut\"), email = \"prama008@ucr.edu\"),\nperson(given = \"Le\", family = \"Zhang\", role = c(\"aut\"), email = \"le.zhang001@email.ucr.edu\"),\nperson(given = \"Thomas\", family = \"Girke\", role = c(\"aut\"), email = \"thomas.girke@ucr.edu\"))", "Description": "systemPipeTools package extends the widely used\nsystemPipeR (SPR) workflow environment with an enhanced toolkit\nfor data visualization, including utilities to automate the\ndata visualizaton for analysis of differentially expressed\ngenes (DEGs). systemPipeTools provides data transformation and\ndata exploration functions via scatterplots, hierarchical\nclustering heatMaps, principal component analysis,\nmultidimensional scaling, generalized principal components,\nt-Distributed Stochastic Neighbor embedding (t-SNE), and MA and\nvolcano plots. 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