{
  "_id": "6abba0a299f7aa8c6aa47206",
  "Package": "switchBox",
  "Version": "1.49.0",
  "Date": "2016-10-03",
  "Title": "Utilities to train and validate classifiers based on pair\nswitching using the K-Top-Scoring-Pair (KTSP) algorithm",
  "Author": "Bahman Afsari <bahman@jhu.edu>, Luigi Marchionni\n<marchion@jhu.edu>, Wikum Dinalankara <wdinala1@jhmi.edu>",
  "Maintainer": "Bahman Afsari <bahman@jhu.edu>, Luigi Marchionni\n<marchion@jhu.edu>, Wikum Dinalankara <wdinala1@jhmi.edu>",
  "Description": "The package offer different classifiers based on\ncomparisons of pair of features (TSP), using various decision\nrules (e.g., majority wins principle).",
  "biocViews": "Software, StatisticalMethod, Classification",
  "License": "GPL-2",
  "Packaged": {
    "Date": "2026-09-29 10:04:55 UTC",
    "User": "root"
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  "NeedsCompilation": "yes",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:39:40 UTC",
  "RemoteUrl": "https://github.com/bioc/switchBox",
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  "_created": "2026-09-29T10:04:55.000Z",
  "_published": "2026-09-29T11:27:30.863Z",
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  "_host": "GitHub-Actions",
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    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
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      "page": "switchBox-package",
      "title": "A package to train and apply K-Top-Scoring-Pair (KTSP) classifiers.",
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        "switchBox-package",
        "switchBox"
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    {
      "page": "KTSP.Classify",
      "title": "Function to classify samples using a KTSP classifier.",
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    {
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        "KTSP.Train"
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      "page": "matTesting",
      "title": "Gene expression matrix for test set data",
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    {
      "page": "matTraining",
      "title": "Gene expression matrix for training set data",
      "topics": [
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      "title": "Function for training the 1-TSP classifier.",
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      "page": "SWAP.Train.KTSP",
      "title": "Function for training the K-TSP classifier.",
      "topics": [
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    {
      "page": "testingGroup",
      "title": "Testing set phenotypes",
      "topics": [
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      "title": "Training set phenotypes",
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      "filename": "switchBox.pdf",
      "title": "Working with the switchBox package",
      "engine": "utils::Sweave",
      "headings": [
        " Introduction ",
        " Installing the package ",
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        "Training KTSP algorithm",
        "Calculate and aggregates the TSP votes",
        "Classifiy samples and compute the classifier performance",
        "Compute the signed TSP scores",
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        " Literature Cited "
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      "modified": "2018-11-16 13:46:25",
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