{
  "_id": "6a1af30d1d7bb097a09f8280",
  "Package": "spikeLI",
  "Type": "Package",
  "Title": "Affymetrix Spike-in Langmuir Isotherm Data Analysis Tool",
  "Version": "2.73.0",
  "Date": "2009-04-03",
  "Author": "Delphine Baillon, Paul Leclercq <paulleclercq@hotmail.com>,\nSarah Ternisien, Thomas Heim, Enrico Carlon\n<enrico.carlon@fys.kuleuven.be>",
  "Maintainer": "Enrico Carlon <enrico.carlon@fys.kuleuven.be>",
  "Description": "SpikeLI is a package that performs the analysis of the\nAffymetrix spike-in data using the Langmuir Isotherm. The aim\nof this package is to show the advantages of a\nphysical-chemistry based analysis of the Affymetrix microarray\ndata compared to the traditional methods. The spike-in (or\nLatin square) data for the HGU95 and HGU133 chipsets have been\ndownloaded from the Affymetrix web site. The model used in the\nspikeLI package is described in details in E. Carlon and T.\nHeim, Physica A 362, 433 (2006).",
  "License": "GPL-2",
  "biocViews": "Microarray, QualityControl",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:31:52 UTC",
  "RemoteUrl": "https://github.com/bioc/spikeLI",
  "RemoteRef": "HEAD",
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  "NeedsCompilation": "no",
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    "User": "root"
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    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
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    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
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    "email": "enrico.carlon@fys.kuleuven.be"
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    "description": "Software for the analysis and comprehension of high-throughput genomic data"
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      "title": "Concentration 95",
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      "tojson": true
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      "object": "hgu",
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        "DGRNA",
        "FILE"
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      "tojson": true
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      "name": "SPIKE_IN",
      "title": "Spike-in Probe-Set Names",
      "object": "SPIKE_IN",
      "file": "SPIKE_IN.rda",
      "class": [
        "character"
      ],
      "fields": [],
      "table": false,
      "tojson": true
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      "object": "SPIKE_IN95",
      "file": "SPIKE_IN95.rda",
      "class": [
        "character"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "SPIKE_INA",
      "title": "Artificial Spike-in probesets",
      "object": "SPIKE_INA",
      "file": "SPIKE_INA.rda",
      "class": [
        "character"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "SPIKE_INB",
      "title": "Bacteria Spike-in probeset names",
      "object": "SPIKE_INB",
      "file": "SPIKE_INB.rda",
      "class": [
        "character"
      ],
      "fields": [],
      "table": false,
      "tojson": true
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    {
      "name": "SPIKE_INH",
      "title": "Human Spike-in probe-set names",
      "object": "SPIKE_INH",
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      "class": [
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      ],
      "fields": [],
      "table": false,
      "tojson": true
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    {
      "page": "spikeLI.package",
      "title": "Analysis of Affymetrix spike-in data (HGU95 and HGU133 Latin square) using the Langmuir Isotherm.",
      "topics": [
        "spikeLI-package",
        "spikeLI"
      ]
    },
    {
      "page": "collapse",
      "title": "Data collapse of all concentrations into a single graph",
      "topics": [
        "collapse"
      ]
    },
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      "page": "conc133",
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        "conc133"
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    },
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      "title": "Concentration 95",
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      "topics": [
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      "page": "Ivsc",
      "title": "Plot of intensity vs. concentration for given probes",
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      ]
    },
    {
      "page": "IvsDG",
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      ]
    },
    {
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      "title": "Spike-in Probe-Set Names",
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