{
  "_id": "6ad3805ce8bc1209867e815e",
  "Package": "spatialdataR",
  "Title": "Representation of Python's spatialdata in R",
  "Version": "0.99.47",
  "Description": "R interface to Python/scverse's 'spatialdata' framework\nfor unified spatial omics data handling. Adheres to OME-NGFF\nstandards, providing lazy, on-disk representations for\nmultiscale images and labels (ZarrArray), as well as points and\nshapes (DuckDB-backed tables). Includes handling of coordinate\ntransformation systems and spatial utilities for cropping,\nmasking, and querying. Integrates tabular annotations as\n'SingleCellExperiment's (via 'anndataR'), enabling\ninteroperable spatial omics workflows across R and Python.",
  "Authors@R": "c(\nperson(\"Helena L.\", \"Crowell\",\nrole=c(\"aut\", \"cre\"),\nemail=\"helena@crowell.eu\",\ncomment=c(ORCID=\"0000-0002-4801-1767\")),\nperson(\"Artür\", \"Manukyan\",\nrole=c(\"aut\"),\nemail=\"artur-man@hotmail.com\",\ncomment=c(ORCID=\"0000-0002-0441-9517\")),\nperson(\"Hugo\", \"Gruson\",\nrole=c(\"aut\"),\nemail=\"hugo.gruson@embl.de\",\ncomment=c(ORCID=\"0000-0002-4094-1476\")),\nperson(\"Vince\", \"Carey\",\nrole=c(\"aut\"),\nemail=\"stvjc@channing.harvard.edu\",\ncomment=c(ORCID=\"0000-0003-4046-0063\")))",
  "biocViews": "DataImport, DataRepresentation, Infrastructure,\nImmunoOncology, GeneExpression, Transcriptomics, SingleCell,\nSpatial",
  "License": "Artistic-2.0",
  "Encoding": "UTF-8",
  "VignetteBuilder": "knitr",
  "BugReports": "https://github.com/HelenaLC/spatialdataR/issues",
  "URL": "https://helenalc.github.io/spatialdataR,\nhttps://github.com/HelenaLC/spatialdataR",
  "Config/roxygen2/version": "8.1.1",
  "Config/testthat/edition": "3",
  "Config/pak/sysreqs": "libabsl-dev libblosc-dev cmake libgdal-dev gdal-bin\nlibgeos-dev libicu-dev libpng-dev libxml2-dev libzstd-dev\nlibssl-dev libproj-dev python3 libsqlite3-dev libudunits2-dev\nxz-utils zlib1g-dev",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-10-17 10:47:45 UTC",
  "RemoteUrl": "https://github.com/bioc/spatialdataR",
  "RemoteRef": "HEAD",
  "RemoteSha": "00e7596c8d72bd9514fc54c7098b1eb8402ce4c0",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-10-17 13:55:16 UTC",
    "User": "root"
  },
  "Author": "Helena L. Crowell [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-4801-1767>),\nArtür Manukyan [aut] (ORCID: <https://orcid.org/0000-0002-0441-9517>),\nHugo Gruson [aut] (ORCID: <https://orcid.org/0000-0002-4094-1476>),\nVince Carey [aut] (ORCID: <https://orcid.org/0000-0003-4046-0063>)",
  "Maintainer": "Helena L. Crowell <helena@crowell.eu>",
  "_user": "bioc",
  "_type": "src",
  "_file": "spatialdataR_0.99.47.tar.gz",
  "_fileid": "https://r2.ropensci.org/8015f929011759fafdb45b0f01d43099944889aa0876fcd018ff6281035ac5cf",
  "_filesize": 1473380,
  "_sha256": "8015f929011759fafdb45b0f01d43099944889aa0876fcd018ff6281035ac5cf",
  "_expires": "2027-01-25T14:04:10.000Z",
  "_created": "2026-10-17T13:55:16.000Z",
  "_published": "2026-10-17T14:04:12.594Z",
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/39038227810",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_bioccheck": {
    "error": 0,
    "warning": 0,
    "note": 7
  },
  "_upstream": "https://github.com/bioc/spatialdataR",
  "_commit": {
    "id": "00e7596c8d72bd9514fc54c7098b1eb8402ce4c0",
    "author": "HelenaLC <helena@crowell.eu>",
    "committer": "HelenaLC <helena@crowell.eu>",
    "message": "resolve version conflicts\n",
    "time": 1792234065
  },
  "_maintainer": {
    "name": "Helena L. Crowell",
    "email": "helena@crowell.eu",
    "login": "helenalc",
    "orcid": "0000-0002-4801-1767",
    "description": "",
    "uuid": 14542264
  },
  "_distro": "resolute",
  "_jobs": [
    {
      "job": 117413335454,
      "time": 157,
      "config": "bioc-checks",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "12103086979"
    },
    {
      "job": 117413335405,
      "time": 469,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "12103486778"
    },
    {
      "job": 117413335414,
      "time": 392,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "12102889296"
    },
    {
      "job": 117413335441,
      "time": 331,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "12103392444"
    },
    {
      "job": 117413335468,
      "time": 295,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "12102593702"
    },
    {
      "job": 117412321360,
      "time": 308,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12103426420"
    },
    {
      "job": 117413335437,
      "time": 175,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "12102829239"
    },
    {
      "job": 117413335494,
      "time": 283,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "12103382372"
    },
    {
      "job": 117413335517,
      "time": 361,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "12102929125"
    },
    {
      "job": 117413335527,
      "time": 381,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "12102849516"
    }
  ],
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.5",
      "role": "Depends"
    },
    {
      "package": "anndataR",
      "version": ">= 1.1.3",
      "role": "Imports"
    },
    {
      "package": "BiocGenerics",
      "version": ">= 0.59.6",
      "role": "Imports"
    },
    {
      "package": "DBI",
      "role": "Imports"
    },
    {
      "package": "DelayedArray",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "duckdb",
      "role": "Imports"
    },
    {
      "package": "duckspatial",
      "role": "Imports"
    },
    {
      "package": "graph",
      "role": "Imports"
    },
    {
      "package": "Matrix",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "Rarr",
      "role": "Imports"
    },
    {
      "package": "RBGL",
      "role": "Imports"
    },
    {
      "package": "rlang",
      "role": "Imports"
    },
    {
      "package": "sf",
      "role": "Imports"
    },
    {
      "package": "S4Vectors",
      "role": "Imports"
    },
    {
      "package": "SingleCellExperiment",
      "role": "Imports"
    },
    {
      "package": "SummarizedExperiment",
      "role": "Imports"
    },
    {
      "package": "SparseArray",
      "role": "Imports"
    },
    {
      "package": "ZarrArray",
      "role": "Imports"
    },
    {
      "package": "BiocStyle",
      "role": "Suggests"
    },
    {
      "package": "EBImage",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "Rgraphviz",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 2,
  "_updates": [
    {
      "week": "2026-09",
      "n": 2
    },
    {
      "week": "2026-12",
      "n": 1
    },
    {
      "week": "2026-13",
      "n": 4
    },
    {
      "week": "2026-14",
      "n": 1
    },
    {
      "week": "2026-15",
      "n": 14
    },
    {
      "week": "2026-17",
      "n": 3
    },
    {
      "week": "2026-18",
      "n": 6
    },
    {
      "week": "2026-19",
      "n": 11
    },
    {
      "week": "2026-20",
      "n": 14
    },
    {
      "week": "2026-21",
      "n": 9
    },
    {
      "week": "2026-22",
      "n": 10
    },
    {
      "week": "2026-23",
      "n": 12
    },
    {
      "week": "2026-27",
      "n": 8
    },
    {
      "week": "2026-29",
      "n": 2
    },
    {
      "week": "2026-33",
      "n": 1
    },
    {
      "week": "2026-36",
      "n": 1
    },
    {
      "week": "2026-37",
      "n": 1
    },
    {
      "week": "2026-40",
      "n": 1
    },
    {
      "week": "2026-41",
      "n": 13
    },
    {
      "week": "2026-42",
      "n": 14
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "0.99.45",
      "bioc": "3.24",
      "repository": "bioc"
    }
  ],
  "_topics": [
    "dataimport",
    "datarepresentation",
    "infrastructure",
    "immunooncology",
    "geneexpression",
    "transcriptomics",
    "singlecell",
    "spatial"
  ],
  "_stars": 39,
  "_contributors": [
    {
      "user": "helenalc",
      "count": 447,
      "uuid": 14542264
    },
    {
      "user": "catalyst-project",
      "count": 279,
      "uuid": 31732326
    },
    {
      "user": "artur-man",
      "count": 101,
      "uuid": 39335576
    },
    {
      "user": "vjcitn",
      "count": 46,
      "uuid": 4624066
    },
    {
      "user": "bisaloo",
      "count": 40,
      "uuid": 10783929
    },
    {
      "user": "const-ae",
      "count": 27,
      "uuid": 5359014
    },
    {
      "user": "drighelli",
      "count": 15,
      "uuid": 22836149
    },
    {
      "user": "louisedck",
      "count": 10,
      "uuid": 36621934
    },
    {
      "user": "csoneson",
      "count": 9,
      "uuid": 5628952
    },
    {
      "user": "giovp",
      "count": 9,
      "uuid": 25887487
    },
    {
      "user": "timtreis",
      "count": 5,
      "uuid": 12818242
    },
    {
      "user": "estellad",
      "count": 4,
      "uuid": 29610938
    }
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 478,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_downloads": {
    "count": 145,
    "source": "https://www.bioconductor.org/packages/stats/bioc/spatialdataR"
  },
  "_devurl": "https://github.com/helenalc/spatialdatar",
  "_pkgdown": "https://helenalc.github.io/spatialdataR",
  "_searchresults": 25,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "extra/spatialdataR.html"
  ],
  "_homeurl": "https://github.com/helenalc/spatialdatar",
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
    "addCT",
    "affine",
    "as.data.frame",
    "axes",
    "centroids",
    "channels",
    "colnames",
    "combine",
    "crop",
    "CTdata",
    "CTgraph",
    "CTlist",
    "CTname",
    "CTpath",
    "CTplot",
    "CTtype",
    "CTunit",
    "data",
    "data_type",
    "element",
    "element<-",
    "extent",
    "feature_key",
    "feature_key<-",
    "filter",
    "flip",
    "flop",
    "geom_type",
    "getTable",
    "hasTable",
    "image",
    "image<-",
    "imageNames",
    "imageNames<-",
    "images",
    "images<-",
    "instance_key",
    "instance_key<-",
    "instances",
    "instances<-",
    "label",
    "label<-",
    "labelNames",
    "labelNames<-",
    "labels",
    "labels<-",
    "layer",
    "mask",
    "meta",
    "mirror",
    "mutate",
    "path",
    "point",
    "point<-",
    "pointNames",
    "pointNames<-",
    "points",
    "points<-",
    "pull",
    "query",
    "readImage",
    "readLabel",
    "readPoint",
    "readShape",
    "readSpatialData",
    "readTable",
    "region",
    "region_key",
    "regions",
    "regions<-",
    "rmvCT",
    "rotate",
    "rownames",
    "scale",
    "select",
    "sequence",
    "setTable",
    "shape",
    "shape<-",
    "shapeNames",
    "shapeNames<-",
    "shapes",
    "shapes<-",
    "SpatialData",
    "SpatialDataAttrs",
    "SpatialDataImage",
    "SpatialDataLabel",
    "SpatialDataPoint",
    "SpatialDataShape",
    "table",
    "table<-",
    "tableNames",
    "tableNames<-",
    "tables",
    "tables<-",
    "transform",
    "translation"
  ],
  "_help": [
    {
      "page": "blobs",
      "title": "`SpatialData` .zarr toy datasets",
      "topics": [
        "blobs"
      ]
    },
    {
      "page": "centroids",
      "title": "Spatial element centroids",
      "topics": [
        "centroids",
        "centroids,ANY-method",
        "centroids,SpatialDataLabel-method",
        "centroids,SpatialDataPoint-method",
        "centroids,SpatialDataShape-method"
      ]
    },
    {
      "page": "combine",
      "title": "Combine two 'SpatialData' objects",
      "topics": [
        "combine",
        "combine,list,missing-method",
        "combine,SpatialData,SpatialData-method"
      ]
    },
    {
      "page": "crop",
      "title": "spatial cropping",
      "topics": [
        "crop",
        "crop,SpatialData-method",
        "crop,SpatialDataArray-method",
        "crop,SpatialDataFrame-method"
      ]
    },
    {
      "page": "CTgraph",
      "title": "Coord. trans. graph",
      "topics": [
        "CTgraph",
        "CTgraph,ANY-method",
        "CTgraph,SpatialData-method",
        "CTgraph,SpatialDataElement-method",
        "CTpath",
        "CTpath,ANY-method",
        "CTpath,SpatialData-method",
        "CTpath,SpatialDataElement-method",
        "CTplot"
      ]
    },
    {
      "page": "CTutils",
      "title": "Coord. trans. utilities",
      "topics": [
        "addCT",
        "addCT,SpatialDataAttrs-method",
        "addCT,SpatialDataElement-method",
        "axes",
        "axes,SpatialDataAttrs-method",
        "axes,SpatialDataElement-method",
        "CTdata",
        "CTdata,SpatialDataAttrs-method",
        "CTdata,SpatialDataElement-method",
        "CTlist",
        "CTlist,SpatialDataAttrs-method",
        "CTlist,SpatialDataElement-method",
        "CTname",
        "CTname,SpatialData-method",
        "CTname,SpatialDataAttrs-method",
        "CTname,SpatialDataElement-method",
        "CTtype",
        "CTtype,SpatialDataAttrs-method",
        "CTtype,SpatialDataElement-method",
        "CTunit",
        "CTunit,SpatialDataAttrs-method",
        "CTunit,SpatialDataElement-method",
        "CTutils",
        "rmvCT",
        "rmvCT,SpatialDataAttrs-method",
        "rmvCT,SpatialDataElement-method"
      ]
    },
    {
      "page": "extent",
      "title": "Spatial element extent",
      "topics": [
        "extent",
        "extent,SpatialData-method",
        "extent,SpatialDataArray-method",
        "extent,SpatialDataFrame-method"
      ]
    },
    {
      "page": "mask",
      "title": "Aggregate data across layers",
      "topics": [
        "mask",
        "mask,SpatialData-method"
      ]
    },
    {
      "page": "misc",
      "title": "Miscellaneous `SpatialData` methods",
      "topics": [
        "misc",
        "show,SpatialData-method",
        "show,SpatialDataArray-method"
      ]
    },
    {
      "page": "path",
      "title": "Retrieve 'SpatialData' on-disk paths",
      "topics": [
        "path",
        "path,SingleCellExperiment-method",
        "path,SpatialData-method",
        "path,SpatialDataArray-method",
        "path,SpatialDataFrame-method"
      ]
    },
    {
      "page": "query",
      "title": "queries",
      "topics": [
        "query",
        "query,SpatialData-method"
      ]
    },
    {
      "page": "readSpatialData",
      "title": "Reading `SpatialData`",
      "topics": [
        "readImage",
        "readLabel",
        "readPoint",
        "readShape",
        "readSpatialData",
        "readTable"
      ]
    },
    {
      "page": "SpatialData",
      "title": "The `SpatialData` class",
      "topics": [
        "$,SpatialData-method",
        "$<-,SpatialData-method",
        ".SpatialData",
        "colnames,SpatialData-method",
        "data",
        "data,SpatialDataElement-method",
        "element",
        "element,SpatialData,ANY-method",
        "element,SpatialData,character-method",
        "element,SpatialData,missing-method",
        "element,SpatialData,numeric-method",
        "element<-",
        "element<-,SpatialData,character-method",
        "image",
        "image<-",
        "imageNames",
        "imageNames<-",
        "images",
        "images,SpatialData-method",
        "images<-",
        "label",
        "label<-",
        "labelNames",
        "labelNames<-",
        "labels",
        "labels,SpatialData-method",
        "labels<-",
        "layer",
        "layer,SpatialData,ANY-method",
        "layer,SpatialData,character-method",
        "meta",
        "meta,SpatialDataElement-method",
        "point",
        "point<-",
        "pointNames",
        "pointNames<-",
        "points",
        "points,SpatialData-method",
        "points<-",
        "rownames,SpatialData-method",
        "shape",
        "shape<-",
        "shapeNames",
        "shapeNames<-",
        "shapes",
        "shapes,SpatialData-method",
        "shapes<-",
        "SpatialData",
        "SpatialData-class",
        "table",
        "table<-",
        "tableNames",
        "tableNames<-",
        "tables",
        "tables,SpatialData-method",
        "tables<-",
        "[,SpatialData,ANY,ANY,ANY-method",
        "[[,SpatialData,character,ANY-method",
        "[[,SpatialData,numeric,ANY-method",
        "[[<-,SpatialData,ANY,ANY,ANY-method",
        "[[<-,SpatialData,character,ANY,ANY-method",
        "[[<-,SpatialData,character,ANY-method",
        "[[<-,SpatialData,numeric,ANY-method"
      ]
    },
    {
      "page": "SpatialDataArray",
      "title": "'SpatialDataArray'",
      "topics": [
        "channels",
        "channels,SpatialDataAttrs-method",
        "channels,SpatialDataElement-method",
        "channels,SpatialDataImage-method",
        "data_type",
        "data_type,DelayedArray-method",
        "data_type,SpatialDataArray-method",
        "dim,SpatialDataArray-method",
        "length,SpatialDataArray-method",
        "SpatialDataArray",
        "SpatialDataImage",
        "SpatialDataLabel",
        "[,SpatialDataImage,ANY,ANY,ANY-method",
        "[,SpatialDataLabel,ANY,ANY,ANY-method"
      ]
    },
    {
      "page": "SpatialDataAttrs",
      "title": "The `SpatialDataAttrs` class",
      "topics": [
        "$,SpatialDataAttrs-method",
        "feature_key",
        "feature_key,SpatialDataAttrs-method",
        "feature_key,SpatialDataPoint-method",
        "feature_key<-",
        "feature_key<-,SpatialDataAttrs,character-method",
        "instances",
        "instances,SingleCellExperiment-method",
        "instances,SpatialDataLabel-method",
        "instances,SpatialDataPoint-method",
        "instances,SpatialDataShape-method",
        "instances<-",
        "instances<-,SingleCellExperiment-method",
        "instance_key",
        "instance_key,list-method",
        "instance_key,SingleCellExperiment-method",
        "instance_key,SpatialDataFrame-method",
        "instance_key,SpatialDataLabel-method",
        "instance_key<-",
        "instance_key<-,SingleCellExperiment,character-method",
        "instance_key<-,SpatialDataAttrs,character-method",
        "region",
        "region,SingleCellExperiment-method",
        "region<-",
        "regions",
        "regions,SingleCellExperiment-method",
        "regions<-",
        "regions<-,SingleCellExperiment,character-method",
        "regions<-,SingleCellExperiment,NULL-method",
        "region_key",
        "region_key,SingleCellExperiment-method",
        "region_key<-",
        "SpatialDataAttrs"
      ]
    },
    {
      "page": "SpatialDataFrame",
      "title": "'SpatialDataFrame'",
      "topics": [
        "$,SpatialDataPoint-method",
        "$,SpatialDataShape-method",
        ".DollarNames.SpatialDataShape",
        "as.data.frame,SpatialDataFrame-method",
        "dim,SpatialDataFrame-method",
        "filter.SpatialDataFrame",
        "geom_type",
        "geom_type,SpatialDataShape-method",
        "length,SpatialDataFrame-method",
        "mutate.SpatialDataFrame",
        "names,SpatialDataFrame-method",
        "pull.SpatialDataFrame",
        "select.SpatialDataFrame",
        "SpatialDataFrame",
        "SpatialDataPoint",
        "SpatialDataShape",
        "[,SpatialDataFrame,ANY,ANY,ANY-method",
        "[[,SpatialDataFrame,ANY,ANY-method"
      ]
    },
    {
      "page": "table-utils",
      "title": "'SpatialData' annotations",
      "topics": [
        "getTable",
        "getTable,SpatialData,ANY-method",
        "getTable,SpatialData,character-method",
        "hasTable",
        "hasTable,SpatialData,ANY-method",
        "hasTable,SpatialData,character-method",
        "meta,SingleCellExperiment-method",
        "setTable",
        "setTable,SpatialData,ANY-method",
        "setTable,SpatialData,character-method",
        "table-utils"
      ]
    },
    {
      "page": "trans",
      "title": "Transformations",
      "topics": [
        "affine",
        "affine,SpatialDataFrame,matrix-method",
        "flip",
        "flip,SpatialDataArray-method",
        "flop",
        "flop,SpatialDataArray-method",
        "mirror",
        "mirror,SpatialDataArray-method",
        "rotate",
        "rotate,SpatialDataArray-method",
        "rotate,SpatialDataFrame-method",
        "scale",
        "scale,SpatialDataArray-method",
        "scale,SpatialDataFrame-method",
        "sequence",
        "sequence,SpatialDataElement-method",
        "trans",
        "transform",
        "transform,SpatialDataElement-method",
        "translation",
        "translation,SpatialDataArray,numeric-method",
        "translation,SpatialDataFrame,numeric-method"
      ]
    }
  ],
  "_readme": "https://github.com/bioc/spatialdataR/raw/HEAD/README.md",
  "_rundeps": [
    "abind",
    "anndataR",
    "arrow",
    "askpass",
    "assertthat",
    "base64enc",
    "BH",
    "Biobase",
    "BiocGenerics",
    "bit",
    "bit64",
    "blob",
    "class",
    "classInt",
    "cli",
    "cpp11",
    "curl",
    "DBI",
    "dbplyr",
    "DelayedArray",
    "digest",
    "dplyr",
    "duckdb",
    "duckspatial",
    "e1071",
    "generics",
    "GenomicRanges",
    "geoarrow",
    "glue",
    "graph",
    "grumpy",
    "here",
    "httr2",
    "IRanges",
    "jsonlite",
    "KernSmooth",
    "lattice",
    "lifecycle",
    "magrittr",
    "Matrix",
    "MatrixGenerics",
    "matrixStats",
    "nanoarrow",
    "openssl",
    "paws.common",
    "paws.storage",
    "pillar",
    "pkgconfig",
    "png",
    "proxy",
    "purrr",
    "R.methodsS3",
    "R.oo",
    "R.utils",
    "R6",
    "rappdirs",
    "Rarr",
    "RBGL",
    "Rcpp",
    "RcppTOML",
    "reticulate",
    "rlang",
    "rprojroot",
    "s2",
    "S4Arrays",
    "S4Vectors",
    "Seqinfo",
    "sf",
    "SingleCellExperiment",
    "SparseArray",
    "stringi",
    "stringr",
    "SummarizedExperiment",
    "sys",
    "tibble",
    "tidyr",
    "tidyselect",
    "units",
    "utf8",
    "uuid",
    "vctrs",
    "withr",
    "wk",
    "xml2",
    "XVector",
    "ZarrArray"
  ],
  "_vignettes": [
    {
      "source": "SpatialData.Rmd",
      "filename": "SpatialData.html",
      "title": "spatialdataR",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Preamble",
        "Installation",
        "Introduction",
        "Representation",
        "Handling",
        "Accession",
        "Subsetting",
        "Internals",
        "Annotations",
        "Transformations",
        "Utilities",
        "Cropping",
        "Masking",
        "Querying",
        "Combining",
        "Coordinates",
        "Appendix",
        "Resources",
        "Session info",
        "References"
      ],
      "created": "2023-04-27 14:17:42",
      "modified": "2026-10-15 09:44:32",
      "commits": 74
    }
  ],
  "_score": 8.808548551240404,
  "_indexed": true,
  "_nocasepkg": "spatialdatar",
  "_universes": [
    "bioc",
    "helenalc"
  ],
  "_previous": "0.99.45",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.99.47",
      "date": "2026-10-17T13:59:10.000Z",
      "distro": "resolute",
      "commit": "00e7596c8d72bd9514fc54c7098b1eb8402ce4c0",
      "fileid": "https://r2.ropensci.org/f6475cd9f90e74f59a043a22be0750575afcd4f4254cf1bf6dd96b9c5b26d74e",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/39038227810"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.99.47",
      "date": "2026-10-17T13:59:08.000Z",
      "distro": "resolute",
      "commit": "00e7596c8d72bd9514fc54c7098b1eb8402ce4c0",
      "fileid": "https://r2.ropensci.org/63e3c5389d169ac1d033c306f03817371c669c708acaf0b9d6cc806cc4c7cb9a",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/39038227810"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.99.47",
      "date": "2026-10-17T13:57:56.000Z",
      "commit": "00e7596c8d72bd9514fc54c7098b1eb8402ce4c0",
      "fileid": "https://r2.ropensci.org/9fcad576b053292ad4f10aa4dad32383a0825a664abaf447ac887c9f3f656c65",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/39038227810"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.99.47",
      "date": "2026-10-17T13:58:05.000Z",
      "commit": "00e7596c8d72bd9514fc54c7098b1eb8402ce4c0",
      "fileid": "https://r2.ropensci.org/e82e486c0cc506fcaf38f83398f1ccbd35f1d92f272036dfd8faf32bca62a2ec",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/39038227810"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.99.47",
      "date": "2026-10-17T13:58:47.000Z",
      "commit": "00e7596c8d72bd9514fc54c7098b1eb8402ce4c0",
      "fileid": "https://r2.ropensci.org/0d808226c116b99e3e93f724f6d806b6ea11b2a988b00cc1e361ea8f6189eda8",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/39038227810"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.99.47",
      "date": "2026-10-17T13:57:11.000Z",
      "commit": "00e7596c8d72bd9514fc54c7098b1eb8402ce4c0",
      "fileid": "https://r2.ropensci.org/c952dc72ec8d8db1d77843d921f4e3468961bb66810812b9c6f8047c8b178e79",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/39038227810"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.99.47",
      "date": "2026-10-17T13:57:20.000Z",
      "commit": "00e7596c8d72bd9514fc54c7098b1eb8402ce4c0",
      "fileid": "https://r2.ropensci.org/bc2adc3a83a9a3d567ed46fefa0c0682a402d8d9a717b4c1d8f2b769d06250bc",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/39038227810"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.99.47",
      "date": "2026-10-17T13:57:13.000Z",
      "commit": "00e7596c8d72bd9514fc54c7098b1eb8402ce4c0",
      "fileid": "https://r2.ropensci.org/c0f37970deaa4117d7e108c47df72edf093dfa8a567006d8609ce4274c30c527",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/39038227810"
    }
  ]
}