{ "_id": "6aca1835fe5cc25786e849db", "Package": "smokingMouse", "Title": "Provides access to smokingMouse project data", "Version": "1.11.0", "Date": "2024-12-10", "Authors@R": "c(\nperson(given=\"Daianna\", family=\"Gonzalez-Padilla\", email=\"glezdaianna@gmail.com\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0009-0005-8348-3195\"))\n)", "Description": "This is an ExperimentHub package that provides access to\nthe data generated and analyzed in the\n[smoking-nicotine-mouse](https://github.com/LieberInstitute/smoking-nicotine-mouse/)\nLIBD project. The datasets contain the expression data of mouse\ngenes, transcripts, exons, and exon-exon junctions across 208\nsamples from pup and adult mouse brain, and adult blood, that\nwere exposed to nicotine, cigarette smoke, or controls. They\nalso contain relevant metadata of these samples and gene\nexpression features, such QC metrics, if they were used after\nfiltering steps and also if the features were differently\nexpressed in the different experiments.", "License": "Artistic-2.0", "BugReports": "https://support.bioconductor.org/tag/smokingMouse", "biocViews": "ExperimentHub, ExpressionData, Mus_musculus_Data, RNASeqData", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.2.3", "Config/testthat/edition": "2", "URL": "https://github.com/LieberInstitute/smokingMouse", "VignetteBuilder": "knitr", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:36:57 UTC", "RemoteUrl": "https://github.com/bioc/smokingMouse", "RemoteRef": "HEAD", "RemoteSha": "9a01d424e222f80b5741ec7d5b71ac47f5267897", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-10 10:44:44 UTC", "User": "root" }, "Author": "Daianna Gonzalez-Padilla [aut, cre] (ORCID:\n)", "Maintainer": "Daianna Gonzalez-Padilla ", "_user": "bioc", "_type": "src", "_file": "smokingMouse_1.11.0.tar.gz", "_fileid": "https://r2.ropensci.org/f643c0471eaeb14e540339efc92356732c5f67caae4fdf87ae5f650abd48d543", "_filesize": 2538334, "_sha256": "f643c0471eaeb14e540339efc92356732c5f67caae4fdf87ae5f650abd48d543", "_expires": "2027-01-18T10:49:23.000Z", "_created": "2026-10-10T10:44:44.000Z", "_published": "2026-10-10T10:49:25.329Z", "_buildurl": "https://github.com/r-universe/bioc/actions/runs/38045739853", "_status": "failure", "_host": "GitHub-Actions", "_bioccheck": { "error": 0, "warning": 1, "note": 4 }, "_upstream": "https://github.com/bioc/smokingMouse", "_commit": { "id": "9a01d424e222f80b5741ec7d5b71ac47f5267897", "author": "lshep ", "committer": "lshep ", "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n", "time": 1777379817 }, "_maintainer": { "name": "Daianna Gonzalez-Padilla", "email": "glezdaianna@gmail.com", "login": "daianna-glez", "linkedin": "in/daianna-glez", "orcid": "0009-0005-8348-3195", "twitter": "@daianna_glez", "description": "@MRCBSU \nGenomic sciences LCG UNAM \nBiostatistics, University of Cambridge ", "uuid": 72838938 }, "_distro": "resolute", "_jobs": [ { "job": 114195504002, "time": 157, "config": "bioc-checks", "r": "4.6.1", "check": "WARNING", "artifact": "11667269749" }, { "job": 114195504083, "time": 205, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "11667229759" }, { "job": 114195504088, "time": 236, "config": "linux-release-x86_64", "r": "4.6.1", "check": "WARNING", "artifact": "11666768717" }, { "job": 114194831664, "time": 236, "config": "source", "r": "4.6.1", "check": "ERROR", "artifact": "11666768432" } ], "_registered": true, "_dependencies": [ { "package": "AnnotationHubData", "role": "Suggests" }, { "package": "BiocStyle", "role": "Suggests" }, { "package": "ExperimentHub", "role": "Suggests" }, { "package": "ExperimentHubData", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "RefManageR", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "sessioninfo", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "bioc", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2026-14", "n": 2 }, { "week": "2026-18", "n": 2 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.11.0", "bioc": "3.24", "repository": "data/experiment" }, { "branch": "release", "version": "1.10.0", "bioc": "3.23", "repository": "data/experiment" } ], "_topics": [ "experimenthub", "expressiondata", "mus_musculus_data", "rnaseqdata", "datapkg" ], "_stars": 1, "_contributors": [ { "user": "daianna-glez", "count": 22, "uuid": 72838938 }, { "user": "lcolladotor", "count": 17, "uuid": 2288213 }, { "user": "lshep", "count": 6, "uuid": 18724380 }, { "user": "hpages", "count": 4, "uuid": 8810451 } ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "followers": 476, "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_devurl": "https://github.com/lieberinstitute/smokingmouse", "_searchresults": 2, "_datapkg": true, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "extra/smokingMouse.html" ], "_cranurl": false, "_exports": [], "_help": [ { "page": "smokingMouse-package", "title": "Get access to the smoking-nicotine-mouse LIBD project data", "topics": [ "smokingMouse-package", "smoking-nicotine-mouse" ] } ], "_readme": "https://github.com/bioc/smokingMouse/raw/HEAD/README.md", "_rundeps": [], "_score": 3.4771212547196626, "_indexed": true, "_nocasepkg": "smokingmouse", "_universes": [ "bioc", "daianna-glez", "lieberinstitute" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.11.0", "date": "2026-10-10T10:48:12.000Z", "distro": "resolute", "commit": "9a01d424e222f80b5741ec7d5b71ac47f5267897", "fileid": "https://r2.ropensci.org/5ff67e3fcbcb1b7f1e736628b96b0f5c0e5766bed6c6a15e2b9478fe813dbc94", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/bioc/actions/runs/38045739853" }, { "r": "4.6.1", "os": "linux", "version": "1.11.0", "date": "2026-10-10T10:48:44.000Z", "distro": "resolute", "commit": "9a01d424e222f80b5741ec7d5b71ac47f5267897", "fileid": "https://r2.ropensci.org/3ef2028d0763ffb3d99f16e64b5f4db2da731a217efdbb7ff053d816d011690a", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/bioc/actions/runs/38045739853" } ] }