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  "Package": "scoreInvHap",
  "Title": "Get inversion status in predefined regions",
  "Version": "1.35.0",
  "Authors@R": "c(person(\"Carlos\", \"Ruiz\", , \"carlos.ruiz@isglobal.org\", role = \"aut\"),\nperson(\"Dolors\", \"Pelegrí\", , \"dolors.pelegri@isglobal.org\", role = \"aut\"),\nperson(\"Juan R.\", \"Gonzalez\", ,\"juanr.gonzalez@isglobal.org\", role = c(\"aut\", \"cre\")))",
  "Maintainer": "Dolors Pelegri-Siso <dolors.pelegri@isglobal.org>",
  "Description": "scoreInvHap can get the samples' inversion status of known\ninversions. scoreInvHap uses SNP data as input and requires the\nfollowing information about the inversion: genotype frequencies\nin the different haplotypes, R2 between the region SNPs and\ninversion status and heterozygote genotypes in the reference.\nThe package include this data for 21 inversions.",
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  "Encoding": "UTF-8",
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  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:45:54 UTC",
  "RemoteUrl": "https://github.com/bioc/scoreInvHap",
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    "User": "root"
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  "Author": "Carlos Ruiz [aut],\nDolors Pelegrí [aut],\nJuan R. Gonzalez [aut, cre]",
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      "fields": [],
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    {
      "page": "adaptRefs",
      "title": "Adapt references to imputed data",
      "topics": [
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      ]
    },
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      "page": "checkSNPs",
      "title": "Check genotype object",
      "topics": [
        "checkSNPs"
      ]
    },
    {
      "page": "classifSNPs",
      "title": "Get similarity scores and probability",
      "topics": [
        "classifSNPs",
        "classifSNPsImpute"
      ]
    },
    {
      "page": "computeScore",
      "title": "Compute all similarity scores for a sample",
      "topics": [
        "computeScore"
      ]
    },
    {
      "page": "correctAlleleTable",
      "title": "Solve genotypes discrepancies",
      "topics": [
        "correctAlleleTable"
      ]
    },
    {
      "page": "getAlleleTable",
      "title": "Compute the allele table",
      "topics": [
        "getAlleleTable"
      ]
    },
    {
      "page": "getGenotypesTable",
      "title": "Get genotypes table",
      "topics": [
        "getGenotypesTable"
      ]
    },
    {
      "page": "getInvStatus",
      "title": "Get the inversion status of a sample",
      "topics": [
        "getInvStatus"
      ]
    },
    {
      "page": "hetRefs",
      "title": "Heterozygote genotypes in the references",
      "topics": [
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      "page": "prepareMap",
      "title": "Modify feature data from VCF",
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      "title": "scoreInvHap: package to get inversion status of predefined regions.",
      "topics": [
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    },
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      "page": "scoreInvHapRes-class",
      "title": "scoreInvHapRes instances",
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