{ "_id": "6a1afd0d1d7bb097a09fdc4c", "Package": "scoreInvHap", "Title": "Get inversion status in predefined regions", "Version": "1.35.0", "Authors@R": "c(person(\"Carlos\", \"Ruiz\", , \"carlos.ruiz@isglobal.org\", role = \"aut\"),\nperson(\"Dolors\", \"Pelegrí\", , \"dolors.pelegri@isglobal.org\", role = \"aut\"),\nperson(\"Juan R.\", \"Gonzalez\", ,\"juanr.gonzalez@isglobal.org\", role = c(\"aut\", \"cre\")))", "Maintainer": "Dolors Pelegri-Siso ", "Description": "scoreInvHap can get the samples' inversion status of known\ninversions. scoreInvHap uses SNP data as input and requires the\nfollowing information about the inversion: genotype frequencies\nin the different haplotypes, R2 between the region SNPs and\ninversion status and heterozygote genotypes in the reference.\nThe package include this data for 21 inversions.", "License": "file LICENSE", "Encoding": "UTF-8", "LazyData": "true", "RoxygenNote": "7.1.1", "VignetteBuilder": "knitr", "biocViews": "SNP, Genetics, GenomicVariation", "Config/pak/sysreqs": "make libbz2-dev liblzma-dev libpng-dev libxml2-dev\nlibssl-dev xz-utils zlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:45:54 UTC", "RemoteUrl": "https://github.com/bioc/scoreInvHap", "RemoteRef": "HEAD", "RemoteSha": "c1c7fd2423f9693200ad4e1bfec3148afa74aebb", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-30 09:51:33 UTC", "User": "root" }, "Author": "Carlos Ruiz [aut],\nDolors Pelegrí [aut],\nJuan R. Gonzalez [aut, cre]", "MD5sum": "f50b7ea262b41b1ea7265f92c5240e7e", "_user": "bioc", "_type": "src", "_file": "scoreInvHap_1.35.0.tar.gz", "_fileid": "794b4eccab4dbaf00526150ee4538551b566451b0af3f5477f771c8c67dc09e9", "_filesize": 954399, "_sha256": "794b4eccab4dbaf00526150ee4538551b566451b0af3f5477f771c8c67dc09e9", "_created": "2026-05-30T09:51:33.000Z", "_published": "2026-05-30T15:06:53.111Z", "_jobs": [ { "job": 78640870449, "time": 211, "config": "bioc-checks", "r": "4.6.0", "check": "ERROR", "artifact": "7307563498" }, { "job": 78640870458, "time": 383, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7307579993" }, { "job": 78640870457, "time": 435, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7307585398" }, { "job": 78640870486, "time": 184, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7309102774" }, { "job": 78640870488, "time": 273, "config": "macos-release-arm64", "r": "4.6.0", "check": 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