{ "_id": "6ad49edc712795fb4dcb0a49", "Package": "scTHI.data", "Type": "Package", "Title": "The package contains examples of single cell data used in\nvignettes and examples of the scTHI package; data contain both\ntumor cells and immune cells from public dataset of glioma", "Version": "1.25.0", "Authors@R": "c(person(\"Francesca Pia\", \"Caruso\", email = \"francescapia.caruso@gmail.com\", role = c(\"aut\")),\nperson(\"Michele\", \"Ceccarelli\", email = \"m.ceccarelli@gmail.com\", role = c(\"aut\", \"cre\")))", "Description": "Data for the vignette and tutorial of the package scTHI.", "License": "GPL-2", "Encoding": "UTF-8", "LazyData": "false", "RoxygenNote": "6.1.1.9000", "biocViews": "ExperimentData, SingleCellData", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:33:53 UTC", "RemoteUrl": "https://github.com/bioc/scTHI.data", "RemoteRef": "HEAD", "RemoteSha": "ed688a6565588915bedef386b63aef8e49226a68", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-18 10:20:47 UTC", "User": "root" }, "Author": "Francesca Pia Caruso [aut],\nMichele Ceccarelli [aut, cre]", "Maintainer": "Michele Ceccarelli ", "_user": "bioc", "_type": "src", "_file": "scTHI.data_1.25.0.tar.gz", "_fileid": "https://r2.ropensci.org/a1d78d659d1832ba350aadad5d6a6d6168b0613d86aea7db79138bdfe3f54583", "_filesize": 17102865, "_sha256": "a1d78d659d1832ba350aadad5d6a6d6168b0613d86aea7db79138bdfe3f54583", "_expires": "2027-01-26T10:26:33.000Z", "_created": "2026-10-18T10:20:47.000Z", "_published": "2026-10-18T10:26:36.132Z", "_buildurl": "https://github.com/r-universe/bioc/actions/runs/39118718036", "_status": "success", "_host": "GitHub-Actions", "_bioccheck": { "error": 2, "warning": 4, "note": 4 }, "_upstream": "https://github.com/bioc/scTHI.data", "_commit": { "id": "ed688a6565588915bedef386b63aef8e49226a68", "author": "lshep ", "committer": "lshep ", "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n", "time": 1777379633 }, "_maintainer": { "name": "Michele Ceccarelli", "email": "m.ceccarelli@gmail.com", "login": "miccec", "twitter": "@mceccarelli", "description": "\n Professor at University of Miami\n", "uuid": 2706649 }, "_distro": "resolute", "_jobs": [ { "job": 117650665878, "time": 122, "config": "bioc-checks", "r": "4.6.1", "check": "ERROR", "artifact": "12133691671" }, { "job": 117650665910, "time": 178, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "12133821081" }, { "job": 117650665955, "time": 137, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "12133651767" }, { "job": 117649778788, "time": 274, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "12133940369" } ], "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.0", "role": "Depends" } ], "_owner": "bioc", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2025-44", "n": 2 }, { "week": "2026-18", "n": 2 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.25.0", "bioc": "3.24", "repository": "data/experiment" }, { "branch": "release", "version": "1.24.0", "bioc": "3.23", "repository": "data/experiment" } ], "_topics": [ "experimentdata", "singlecelldata", "datapkg" ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "followers": 478, "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_mentions": 1, "_searchresults": 18, "_datapkg": true, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "extra/scTHI.data.html" ], "_cranurl": false, "_exports": [], "_datasets": [ { "name": "H3K27", "title": "Example expression matrix for scTHI.", "object": "H3K27", "file": "H3K27.rda", "class": [ "matrix", "array" ], "fields": [], "rows": 21673, "table": true, "tojson": true }, { "name": "H3K27.meta", "title": "Annotation for the H3K27 e expression matrix for scTHI.", "object": "H3K27.meta", "file": "H3K27.meta.rda", "class": [ "data.frame" ], "fields": [ "Sample", "GenesExpressed", "HousekeepingGeneExpression", "Type", "Cellcycle", "OPC.variable", "OC.like", "AC.like", "OPC.like" ], "rows": 527, "table": true, "tojson": true }, { "name": "MGH45", "title": "Example expression matrix for scTHI.", "object": "MGH45", "file": "MGH45.rda", "class": [ "matrix", "array" ], "fields": [], "rows": 17584, "table": true, "tojson": true }, { "name": "MGH45.annotation", "title": "Annotation for Example expression matrix for scTHI.", "object": "MGH45.annotation", "file": "MGH45.annotation.rda", "class": [ "data.frame" ], "fields": [ "cell", "type" ], "rows": 608, "table": true, "tojson": true }, { "name": "scExample", "title": "Example expression matrix for scTHI.", "object": "scExample", "file": "scExample.rda", "class": [ "matrix", "array" ], "fields": [ "BCH836-P01-A03", "BCH836-P01-A04", "BCH836-P01-A06", "BCH836-P01-A08", "BCH836-P01-A11", "BCH836-P01-B01", "BCH836-P01-B03", "BCH836-P01-B04", "BCH836-P01-B05", "BCH836-P01-B06", "BCH836-P01-B07", "BCH836-P01-B09", "BCH836-P01-B12", "BCH836-P01-C03", "BCH836-P01-C04", "BCH836-P01-C06", "BCH836-P01-C08", "BCH836-P01-C09", "BCH836-P01-C10", "BCH836-P01-C11", "BCH836-P01-C12", "BCH836-P01-D01", "BCH836-P01-D02", "BCH836-P01-D03", "BCH836-P01-D04", "BCH836-P01-D05", "BCH836-P01-D07", "BCH836-P01-D08", "BCH836-P01-D12", "BCH836-P01-E01", "BCH836-P01-E04", "BCH836-P01-E06", "BCH836-P01-E07", "BCH836-P01-E08", "BCH836-P01-E10", "BCH836-P01-E11", "BCH836-P01-E12", "BCH836-P01-F02", "BCH836-P01-F05", "BCH836-P01-F06", "BCH836-P01-F07", "BCH836-P01-F08", "BCH836-P01-F11", "BCH836-P01-F12", "BCH836-P01-G01", "BCH836-P01-G02", "BCH836-P01-G03", "BCH836-P01-G04", "BCH836-P01-G06", "BCH836-P01-G07", "BCH836-P01-G08", "BCH836-P01-G09", "BCH836-P01-G10", "BCH836-P01-G11", "BCH836-P01-G12", "BCH836-P01-H01", "BCH836-P01-H02", "BCH836-P01-H03", "BCH836-P01-H04", "BCH836-P01-H05", "BCH836-P01-H06", "BCH836-P01-H08", "BCH836-P01-H09", "BCH836-P01-H11", "BCH836-P01-H12", "BCH836-P02-A03", "BCH836-P02-A04", "BCH836-P02-A05", "BCH836-P02-A06", "BCH836-P02-A08", "BCH836-P02-A09", "BCH836-P02-A10", "BCH836-P02-A12", "BCH836-P02-B01", "BCH836-P02-B02", "BCH836-P02-B03", "BCH836-P02-B04", "BCH836-P02-B07", "BCH836-P02-B09", "BCH836-P02-B10", "BCH836-P02-B11", "BCH836-P02-B12", "BCH836-P02-C01", "BCH836-P02-C03", "BCH836-P02-C04", "BCH836-P02-C05", "BCH836-P02-C07", "BCH836-P02-C10", "BCH836-P02-C11", "BCH836-P02-C12", "BCH836-P02-D02", "BCH836-P02-D03", "BCH836-P02-D04", "BCH836-P02-D05", "BCH836-P02-D08", "BCH836-P02-D10", "BCH836-P02-D11", "BCH836-P02-E01", "BCH836-P02-E02", "BCH836-P02-E04" ], "rows": 2000, "table": true, "tojson": true } ], "_help": [ { "page": "H3K27", "title": "Example expression matrix for scTHI.", "topics": [ "H3K27" ] }, { "page": "H3K27.meta", "title": "Annotation for the H3K27 e expression matrix for scTHI.", "topics": [ "H3K27.meta" ] }, { "page": "MGH45", "title": "Example expression matrix for scTHI.", "topics": [ "MGH45" ] }, { "page": "MGH45.annotation", "title": "Annotation for Example expression matrix for scTHI.", "topics": [ "MGH45.annotation" ] }, { "page": "scExample", "title": "Example expression matrix for scTHI.", "topics": [ "scExample" ] } ], "_readme": "https://github.com/bioc/scTHI.data/raw/HEAD/README.md", "_rundeps": [], "_score": 3.255272505103306, "_indexed": true, "_nocasepkg": "scthi.data", "_universes": [ "bioc", "miccec" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.25.0", "date": "2026-10-18T10:25:52.000Z", "distro": "resolute", "commit": "ed688a6565588915bedef386b63aef8e49226a68", "fileid": "https://r2.ropensci.org/5e99612fe481ccdb56b46b7272ce25db46c62313b5e74394da05ca5be791eb61", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/39118718036" }, { "r": "4.6.1", "os": "linux", "version": "1.25.0", "date": "2026-10-18T10:25:11.000Z", "distro": "resolute", "commit": "ed688a6565588915bedef386b63aef8e49226a68", "fileid": "https://r2.ropensci.org/7fedc528650298d7fed0198654b038bc233306189c844f79bdf9da490baa6286", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/39118718036" } ] }