{ "_id": "6a1af94b1d7bb097a09fb632", "Package": "sagenhaft", "Version": "1.83.0", "Date": "2020-01-10", "Title": "Collection of functions for reading and comparing SAGE libraries", "Author": "Tim Beissbarth ,\nwith contributions from Gordon Smyth ", "Reference": "Beissbarth T, Hyde L, Smyth GK, Job C, Boon WM, Tan SS,\nScott HS, Speed TP: Statistical modeling of sequencing errors\nin SAGE libraries, Bioinformatics, 2004 20(Suppl. 1):i31-9.", "Maintainer": "Tim Beissbarth\n", "Description": "This package implements several functions useful for\nanalysis of gene expression data by sequencing tags as done in\nSAGE (Serial Analysis of Gene Expressen) data, i.e. extraction\nof a SAGE library from sequence files, sequence error\ncorrection, library comparison. Sequencing error correction is\nimplementing using an Expectation Maximization Algorithm based\non a Mixture Model of tag counts.", "biocViews": "SAGE", "License": "GPL (>= 2)", "URL": "http://www.bioinf.med.uni-goettingen.de", "git_url": "https://git.bioconductor.org/packages/sagenhaft", "git_branch": "RELEASE_3_10", "git_last_commit": "c49299a", "git_last_commit_date": "2019-10-29", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-30 09:49:01 UTC", "User": "root" }, "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:30:52 UTC", "RemoteUrl": "https://github.com/bioc/sagenhaft", "RemoteRef": "HEAD", "RemoteSha": "94c3e809d27075e9143f7d5ddcaaf60e80bdd98c", "MD5sum": "9f06b6c014734e46cd32ccd534542828", "_user": "bioc", "_type": "src", "_file": "sagenhaft_1.83.0.tar.gz", "_fileid": "358bae3eb8f55b66fc11ac7ea229cff2b396a9bfb02a826fba1a4bb31f97e45d", "_filesize": 2778548, "_sha256": "358bae3eb8f55b66fc11ac7ea229cff2b396a9bfb02a826fba1a4bb31f97e45d", 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