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  "Package": "planttfhunter",
  "Title": "Identification and classification of plant transcription factors",
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  "Date": "2022-03-10",
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  "Description": "planttfhunter is used to identify plant transcription\nfactors (TFs) from protein sequence data and classify them into\nfamilies and subfamilies using the classification schemes\nimplemented in PlantTFDB and TAPscan. TFs are also classified\ninto structure-based families, classes, and superclasses as in\nPlant-TFClass. TFs are identified using pre-built hidden Markov\nmodel profiles for DNA-binding domains. Then, auxiliary and\nforbidden domains are used with DNA-binding domains to classify\nTFs into families and subfamilies (when applicable). TFs can be\nclassified in 58 different TF families/subfamilies with\nPlantTFDB's scheme, and in over 130 families of\ntranscription-associated proteins with TAPscan's scheme.",
  "License": "GPL-3",
  "URL": "https://github.com/almeidasilvaf/planttfhunter",
  "BugReports": "https://support.bioconductor.org/t/planttfhunter",
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  "Repository": "https://bioc.r-universe.dev",
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  "Author": "Fabrício Almeida-Silva [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-5314-2964>),\nYves Van de Peer [aut] (ORCID: <https://orcid.org/0000-0003-4327-3730>)",
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