{ "_id": "6a1ae89d1d7bb097a09f21c2", "Package": "plaid", "Title": "PLAID ultrafast gene set enrichment scoring", "Version": "1.1.0", "Authors@R": "c(\nperson(\"Ivo\", \"Kwee\", , \"ivo.kwee@bigomics.ch\", role = \"aut\",\ncomment = c(ORCID = \"0000-0002-2751-4218\")),\nperson(\"Antonino\", \"Zito\", , \"antonino.zito@bigomics.ch\", role = \"cre\",\ncomment = c(ORCID = \"0000-0003-1931-984X\"))\n)", "Description": "PLAID (Pathway Level Average Intensity Detection) is an\nultra-fast method to compute single-sample enrichment scores\nfor gene expression or proteomics data. For each sample, plaid\ncomputes the gene set score as the average intensity of the\ngenes/proteins in the gene set. The output is a gene set score\nmatrix suitable for further analyses.", "License": "GPL-3", "URL": "https://github.com/bigomics/plaid,\nhttps://bigomics.github.io/plaid/", "BugReports": "https://github.com/bigomics/plaid/issues", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.3", "Config/testthat/edition": "3", "biocViews": "GeneSetEnrichment, GeneExpression, Proteomics", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "make libmagick++-dev gsfonts libicu-dev libpng-dev\nlibxml2-dev libssl-dev zlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 13:06:07 UTC", "RemoteUrl": "https://github.com/bioc/plaid", "RemoteRef": "HEAD", "RemoteSha": "6d2ad5c15e15698c566e89ed27d1f8561b5fdb5e", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-30 09:37:34 UTC", "User": "root" }, "Author": "Ivo Kwee [aut] (ORCID: ),\nAntonino Zito [cre] (ORCID: )", "Maintainer": "Antonino Zito ", "MD5sum": "67c8eefcc862b43e223f4bbb67fafdad", "_user": "bioc", "_type": "src", "_file": "plaid_1.1.0.tar.gz", "_fileid": "7deb13cbc0fcd3d9fc7887ca805735fac5f6c0cd047e2a2bcebcff2beb8c64f1", "_filesize": 6323358, "_sha256": "7deb13cbc0fcd3d9fc7887ca805735fac5f6c0cd047e2a2bcebcff2beb8c64f1", "_created": "2026-05-30T09:37:34.000Z", "_published": "2026-05-30T13:39:41.003Z", "_jobs": [ { "job": 78640139351, "time": 202, "config": "bioc-checks", "r": "4.6.0", "check": "NOTE", "artifact": "7307342420" }, { "job": 78640139363, "time": 385, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7307359875" }, { "job": 78640139366, "time": 355, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7307356943" }, { "job": 78640139357, "time": 167, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7308574465" }, { "job": 78640139359, "time": 219, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7308580455" }, { "job": 78639472521, "time": 304, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7307233636" }, { "job": 78640139352, "time": 152, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7307337799" }, { "job": 78640139369, "time": 256, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7307347616" }, { "job": 78640139376, "time": 244, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7307347286" }, { "job": 78640139378, "time": 305, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7307352810" } ], "_bioccheck": { "error": 0, "warning": 0, "note": 7 }, "_buildurl": "https://github.com/r-universe/bioc/actions/runs/26676011422", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/bioc/plaid", "_commit": { "id": "6d2ad5c15e15698c566e89ed27d1f8561b5fdb5e", "author": "A Wokaty ", "committer": "A Wokaty ", "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n", "time": 1777381567 }, "_maintainer": { "name": "Antonino Zito", "email": "antonino.zito@bigomics.ch", "login": "zitoa", "description": "Bioinformatics & biostats here on github. 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