{
  "_id": "6aca183bfe5cc25786e849e3",
  "Package": "octad.db",
  "Title": "Open Cancer TherApeutic Discovery (OCTAD) database",
  "Version": "1.15.1",
  "Authors@R": "c(person(given = \"E.\",\nfamily = \"Chekalin\",\nrole = c(\"aut\", \"cre\"),\nemail = \"eygen.chekalin@gmail.com\"),\nperson(given = \"S.\",\nfamily = \"Paithankar\",role =c(\"aut\")),\nperson(given = \"B.\",\nfamily = \"Zeng\",role =c(\"aut\")),\nperson(given = \"B.\",\nfamily = \"Glicksberg\",role =\"ctb\"),\nperson(given = \"P.\",\nfamily = \"Newbury\",role =\"ctb\"),\nperson(given = \"J.\",\nfamily = \"Xing\",role =\"ctb\"),\nperson(given = \"K.\",\nfamily = \"Liu\",role =\"ctb\"),\nperson(given = \"A.\",\nfamily = \"Wen\",role =\"ctb\"),\nperson(given = \"D.\",\nfamily = \"Joseph\",role =\"ctb\"),\nperson(given = \"B.\",\nfamily = \"Chen\",\nrole =\"aut\",\nemail = \"chenbi12@msu.edu\")\n)",
  "Description": "Open Cancer TherApeutic Discovery (OCTAD) package implies\nsRGES approach for the drug discovery. The essential idea is to\nidentify drugs that reverse the gene expression signature of a\ndisease by tamping down over-expressed genes and stimulating\nweakly expressed ones. The following package contains all\nrequired precomputed data for whole OCTAD pipeline computation.",
  "License": "Artistic-2.0",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.2.1",
  "biocViews": "ExperimentData, CancerData, ExperimentHub, SequencingData,\nExpressionData",
  "VignetteBuilder": "knitr",
  "Config/Bioconductor/UnsupportedPlatforms": "windows",
  "Config/pak/sysreqs": "libicu-dev libpng-dev libssl-dev zlib1g-dev",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-05-29 18:37:34 UTC",
  "RemoteUrl": "https://github.com/bioc/octad.db",
  "RemoteRef": "HEAD",
  "RemoteSha": "ab0fa96ac3100fbe83199fd19c1b5b127cede8e0",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-10-10 10:43:34 UTC",
    "User": "root"
  },
  "Author": "E. Chekalin [aut, cre],\nS. Paithankar [aut],\nB. Zeng [aut],\nB. Glicksberg [ctb],\nP. Newbury [ctb],\nJ. Xing [ctb],\nK. Liu [ctb],\nA. Wen [ctb],\nD. Joseph [ctb],\nB. Chen [aut]",
  "Maintainer": "E. Chekalin <eygen.chekalin@gmail.com>",
  "_user": "bioc",
  "_type": "src",
  "_file": "octad.db_1.15.1.tar.gz",
  "_fileid": "https://r2.ropensci.org/12dc9f1a05c73d1915993bc2748b62b73bed942ba5b22b53723ba0f5f0338d37",
  "_filesize": 107996,
  "_sha256": "12dc9f1a05c73d1915993bc2748b62b73bed942ba5b22b53723ba0f5f0338d37",
  "_expires": "2027-01-18T10:49:29.000Z",
  "_created": "2026-10-10T10:43:34.000Z",
  "_published": "2026-10-10T10:49:31.536Z",
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/38045711394",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_bioccheck": {
    "error": 0,
    "warning": 1,
    "note": 5
  },
  "_upstream": "https://github.com/bioc/octad.db",
  "_commit": {
    "id": "ab0fa96ac3100fbe83199fd19c1b5b127cede8e0",
    "author": "A Wokaty <awokaty@users.noreply.github.com>",
    "committer": "A Wokaty <awokaty@users.noreply.github.com>",
    "message": "Bump version\n",
    "time": 1780079854
  },
  "_maintainer": {
    "name": "E. Chekalin",
    "email": "eygen.chekalin@gmail.com",
    "login": "lionir",
    "description": "",
    "uuid": 39910199
  },
  "_distro": "resolute",
  "_jobs": [
    {
      "job": 114195338217,
      "time": 136,
      "config": "bioc-checks",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "11667663976"
    },
    {
      "job": 114195338146,
      "time": 231,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "11667604248"
    },
    {
      "job": 114195338206,
      "time": 307,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "11666923740"
    },
    {
      "job": 114194761094,
      "time": 200,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11667509005"
    }
  ],
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.2.0",
      "role": "Depends"
    },
    {
      "package": "ExperimentHub",
      "role": "Depends"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 1,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    },
    {
      "week": "2026-22",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.15.1",
      "bioc": "3.24",
      "repository": "data/experiment"
    },
    {
      "branch": "release",
      "version": "1.14.0",
      "bioc": "3.23",
      "repository": "data/experiment"
    }
  ],
  "_topics": [
    "experimentdata",
    "cancerdata",
    "experimenthub",
    "sequencingdata",
    "expressiondata",
    "datapkg"
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 476,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_searchresults": 6,
  "_datapkg": true,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/octad.db.html",
    "extra/readme.html",
    "extra/readme.md"
  ],
  "_cranurl": false,
  "_exports": [
    ".my_internal_global_variables",
    "get_ExperimentHub_data"
  ],
  "_help": [
    {
      "page": "get_ExperimentHub_data",
      "title": "Download file from Experimental Hub",
      "topics": [
        "get_ExperimentHub_data"
      ]
    },
    {
      "page": "octad.db",
      "title": "Open Cancer TherApeutic Discovery (OCTAD) database package",
      "topics": [
        "octad.db"
      ]
    }
  ],
  "_readme": "https://github.com/bioc/octad.db/raw/HEAD/README.md",
  "_rundeps": [
    "AnnotationDbi",
    "AnnotationHub",
    "askpass",
    "Biobase",
    "BiocBaseUtils",
    "BiocFileCache",
    "BiocGenerics",
    "BiocManager",
    "BiocVersion",
    "Biostrings",
    "bit",
    "bit64",
    "blob",
    "cachem",
    "cli",
    "cpp11",
    "crayon",
    "curl",
    "DBI",
    "dbplyr",
    "dplyr",
    "ExperimentHub",
    "fastmap",
    "filelock",
    "generics",
    "glue",
    "httr",
    "httr2",
    "IRanges",
    "jsonlite",
    "KEGGREST",
    "lifecycle",
    "magrittr",
    "memoise",
    "mime",
    "openssl",
    "pillar",
    "pkgconfig",
    "png",
    "purrr",
    "R6",
    "rappdirs",
    "rlang",
    "RSQLite",
    "S4Vectors",
    "Seqinfo",
    "stringi",
    "stringr",
    "sys",
    "tibble",
    "tidyr",
    "tidyselect",
    "utf8",
    "vctrs",
    "withr",
    "XVector",
    "yaml"
  ],
  "_vignettes": [
    {
      "source": "octad.db.Rmd",
      "filename": "octad.db.html",
      "title": "Open Cancer TherApeutic Discovery (OCTAD) database",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Evgenii Chekalin, Billy Zeng, Patrick Newbury, Benjamin Glicksberg, Jing Xing, Ke Liu, Dimitri Joseph, Bin Chen",
        "Package overview",
        "Session information"
      ],
      "created": "2021-10-25 15:27:32",
      "modified": "2022-09-15 14:03:36",
      "commits": 15
    }
  ],
  "_score": 4.653212513775344,
  "_indexed": true,
  "_nocasepkg": "octad.db",
  "_universes": [
    "bioc",
    "lionir"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.15.1",
      "date": "2026-10-10T10:46:32.000Z",
      "distro": "resolute",
      "commit": "ab0fa96ac3100fbe83199fd19c1b5b127cede8e0",
      "fileid": "https://r2.ropensci.org/2d2493c2bd6d5deb8aeb025902ce671c6fb7f2ca80e89e13414e8b9b5db0561a",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/38045711394"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.15.1",
      "date": "2026-10-10T10:47:57.000Z",
      "distro": "resolute",
      "commit": "ab0fa96ac3100fbe83199fd19c1b5b127cede8e0",
      "fileid": "https://r2.ropensci.org/14e575b3893b8848bdcbca7f2f03a827e01894ede859273051a921d552fea0e3",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/38045711394"
    }
  ]
}