{ "_id": "6a103ca6acfb0bcc41c9bfd8", "Package": "minet", "Title": "Mutual Information NETworks", "Version": "3.71.0", "Date": "2014-07", "Author": "Patrick E. Meyer, Frederic Lafitte, Gianluca Bontempi", "Description": "This package implements various algorithms for inferring\nmutual information networks from data.", "Maintainer": "Patrick E. Meyer ", "License": "Artistic-2.0", "URL": "http://minet.meyerp.com", "biocViews": "Microarray, GraphAndNetwork, Network, NetworkInference", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:33:03 UTC", "RemoteUrl": "https://github.com/bioc/minet", "RemoteRef": "HEAD", "RemoteSha": "26dec9b1d61829abbbaf60c36bfd701b76735be3", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-05-11 10:06:11 UTC", "User": "root" }, "MD5sum": "606b5ba4a2f60514e049e45507f2cc58", "_user": "bioc", "_type": "src", "_file": "minet_3.71.0.tar.gz", "_fileid": "e2ae7a4a050cd10d716abee15fd50bae7bff976791961ea8479eea4f208668f2", "_filesize": 242077, "_sha256": "e2ae7a4a050cd10d716abee15fd50bae7bff976791961ea8479eea4f208668f2", "_created": "2026-05-11T10:06:11.000Z", "_published": "2026-05-22T11:23:18.752Z", "_jobs": [ { "job": 77369799079, "time": 130, "config": "bioc-checks", "r": "4.6.0", "check": "ERROR", "artifact": "6915695749" }, { "job": 77369798737, "time": 136, "config": "linux-devel-arm64", "r": "4.7.0", "check": "NOTE", "artifact": "6915695610" }, { "job": 77369798898, "time": 119, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "6915692551" }, { "job": 77369799344, "time": 113, "config": "linux-release-arm64", "r": "4.6.0", "check": "NOTE", "artifact": "6915688435" }, { "job": 77369799409, "time": 285, "config": "linux-release-x86_64", "r": "4.6.0", "check": "NOTE", "artifact": "6915744330" }, { "job": 77369799236, "time": 85, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "NOTE", "artifact": "6915698378" }, { "job": 77369798875, "time": 157, "config": "macos-oldrel-x86_64", "r": "4.5.3", "check": "NOTE", "artifact": "6915720755" }, { "job": 77369799329, "time": 122, "config": "macos-release-arm64", "r": "4.6.0", "check": "NOTE", "artifact": "6915715108" }, { "job": 77369798627, "time": 205, "config": "macos-release-x86_64", "r": "4.6.0", "check": "NOTE", "artifact": "6915728582" }, { "job": 77369798348, "time": 156, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "6915653072" }, { "job": 77369798160, "time": 85, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7159307906" }, { "job": 77369798610, "time": 114, "config": "windows-devel", "r": "4.7.0", "check": "NOTE", "artifact": "6915689165" }, { "job": 77369798670, "time": 102, "config": "windows-oldrel", "r": "4.5.3", "check": "NOTE", "artifact": "6915685635" }, { "job": 77369798912, "time": 108, "config": "windows-release", "r": "4.6.0", "check": "NOTE", "artifact": "6915687379" } ], "_bioccheck": { "error": 2, "warning": 1, "note": 9 }, "_buildurl": "https://github.com/r-universe/bioc/actions/runs/25663554013", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/bioc/minet", "_commit": { "id": "26dec9b1d61829abbbaf60c36bfd701b76735be3", "author": "A Wokaty ", "committer": "A Wokaty ", "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n", "time": 1777379583 }, "_maintainer": { "name": "Patrick E. Meyer", "email": "software@meyerp.com", "login": "meyerp-software", "uuid": 44974966 }, "_distro": "noble", "_registered": true, "_dependencies": [ { "package": "infotheo", "role": "Imports" } ], "_owner": "bioc", "_selfowned": true, "_usedby": 15, "_updates": [ { "week": "2025-44", "n": 2 }, { "week": "2026-18", "n": 2 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "3.71.0", "bioc": "3.24" }, { "branch": "release", "version": "3.70.0", "bioc": "3.23" } ], "_topics": [ "microarray", "graphandnetwork", "network", "networkinference", "cpp" ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_downloads": { "count": 1179, "source": "https://www.bioconductor.org/packages/stats/bioc/minet" }, "_mentions": 36, "_searchresults": 128, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/minet.html", "manual.pdf" ], "_realowner": "bioc", "_cranurl": false, "_releases": [ { "version": "1.1.0", "date": "2007-12-12" }, { "version": "1.1.3", "date": "2008-03-03" }, { "version": "1.1.5", "date": "2008-06-13" }, { "version": "1.1.6", "date": "2008-09-16" }, { "version": "1.1.7", "date": "2009-01-05" }, { "version": "1.4.0", "date": "2009-05-10" }, { "version": "1.6.0", "date": "2009-05-11" }, { "version": "2.0.0", "date": "2009-08-20" }, { "version": "2.4.0", "date": "2010-05-01" }, { "version": "3.2", "date": "2010-10-01" }, { "version": "3.4.0", "date": "2010-10-26" }, { "version": "3.6.0", "date": "2011-04-26" } ], "_exports": [ "aracne", "auc.pr", "auc.roc", "build.mim", "clr", "fscores", "minet", "mrnet", "mrnetb", "pr", "rates", "show.pr", "show.roc", "validate" ], "_datasets": [ { "name": "syn.data", "title": "Simulated Gene Expression Data", "object": "syn.data", "file": "syn.data.rda", "class": [ "data.frame" ], "fields": [ "CDC11", "SWI4", "CDC10", "SPT16", "SWI4_SWI6", "ACT1", "HTB1", "HO", "CAF4", "MBP1_SWI6", "PHO2", "CTS1", "ACE2", "TRP4", "LEU2", "FLO1", "CLB5", "CLB6", "FLO10", "SNF6", "PCL1", "PHO5", "GAL1", "LEU3", "SIN3", "STE6", "HDA1_TUP1", "TUP1", "EGT2", "CLN2", "FUS1", "UME6", "RAD5", "CHO2", "INO2_INO4", "RNR3", "SUC2", "MEK1", "LEU4", "CAF16", "CDC6", "PHO4", "POX1", "ADH2", "PHO84", "CAR1", "ALPHA1", "FAS1", "SPT21", "MIG1" ], "rows": 100, "table": true, "tojson": true }, { "name": "syn.net", "title": "SynTReN Source Network", "object": "syn.net", "file": "syn.net.rda", "class": [ "matrix", "array" ], "fields": [ "CDC11", "SWI4", "CDC10", "SPT16", "SWI4_SWI6", "ACT1", "HTB1", "HO", "CAF4", "MBP1_SWI6", "PHO2", "CTS1", "ACE2", "TRP4", "LEU2", "FLO1", "CLB5", "CLB6", "FLO10", "SNF6", "PCL1", "PHO5", "GAL1", "LEU3", "SIN3", "STE6", "HDA1_TUP1", "TUP1", "EGT2", "CLN2", "FUS1", "UME6", "RAD5", "CHO2", "INO2_INO4", "RNR3", "SUC2", "MEK1", "LEU4", "CAF16", "CDC6", "PHO4", "POX1", "ADH2", "PHO84", "CAR1", "ALPHA1", "FAS1", "SPT21", "MIG1" ], "rows": 50, "table": true, "tojson": true } ], "_help": [ { "page": "aracne", "title": "Algorithm for the Reconstruction of Accurate Cellular NEtworks", "topics": [ "aracne" ] }, { "page": "build.mim", "title": "Build Mutual Information Matrix", "topics": [ "build.mim" ] }, { "page": "clr", "title": "Context Likelihood or Relatedness Network", "topics": [ "clr" ] }, { "page": "minet", "title": "Mutual Information Network", "topics": [ "minet" ] }, { "page": "mrnet", "title": "Maximum Relevance Minimum Redundancy", "topics": [ "mrnet" ] }, { "page": "mrnetb", "title": "Maximum Relevance Minimum Redundancy Backward", "topics": [ "mrnetb" ] }, { "page": "syn.data", "title": "Simulated Gene Expression Data", "topics": [ "syn.data" ] }, { "page": "syn.net", "title": "SynTReN Source Network", "topics": [ "syn.net" ] }, { "page": "validate", "title": "Inference Validation", "topics": [ "validate" ] }, { "page": "vis.res", "title": "Visualize Results", "topics": [ "auc.pr", "auc.roc", "fscores", "pr", "rates", "show.pr", "show.roc", "vis.res" ] } ], "_rundeps": [ "infotheo" ], "_sysdeps": [ { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "14.2.0-4ubuntu2~24.04.1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" } ], "_score": 6.132966284182282, "_indexed": true, "_nocasepkg": "minet", "_universes": [ "bioc", "meyerp-software" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "3.71.0", "date": "2026-05-11T10:08:38.000Z", "distro": "noble", "arch": "aarch64", "commit": "26dec9b1d61829abbbaf60c36bfd701b76735be3", "fileid": "f13296294f6961bf3519a2da0969a191143dad0bedde26a4c3f26f61b05511b5", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25663554013" }, { "r": "4.7.0", "os": "linux", "version": "3.71.0", "date": "2026-05-11T10:08:26.000Z", "distro": "noble", "arch": "x86_64", "commit": "26dec9b1d61829abbbaf60c36bfd701b76735be3", "fileid": "0f78b59eb9d050ab586425a36b30b325dced06e0212bdf2d298fc1f7a6873c62", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25663554013" }, { "r": "4.6.0", "os": "linux", "version": "3.71.0", "date": "2026-05-11T10:08:15.000Z", "distro": "noble", "arch": "aarch64", "commit": "26dec9b1d61829abbbaf60c36bfd701b76735be3", "fileid": "f90a46310a49f803f3b949a10528a6e34cc421acb07314038328f790dfdd526f", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25663554013" }, { "r": "4.6.0", "os": "linux", "version": "3.71.0", "date": "2026-05-11T10:11:13.000Z", "distro": "noble", "arch": "x86_64", "commit": "26dec9b1d61829abbbaf60c36bfd701b76735be3", "fileid": "a76a906f18b09e9ea5a69553d47abc19675a776e5d3fec2098bac9abfd575429", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25663554013" }, { "r": "4.5.3", "os": "mac", "version": "3.71.0", "date": "2026-05-11T10:08:45.000Z", "arch": "aarch64", "commit": "26dec9b1d61829abbbaf60c36bfd701b76735be3", "fileid": "599269a330a3fbc1cf7711f24d4d7db508994bee90c123ecbc1a145a1ca53e6d", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25663554013" }, { "r": "4.5.3", "os": "mac", "version": "3.71.0", "date": "2026-05-11T10:09:47.000Z", "arch": "x86_64", "commit": "26dec9b1d61829abbbaf60c36bfd701b76735be3", "fileid": "202f3f104834c3cb9f7e979d472f175cf55682240b0da4d7e5c5442f4d48e832", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25663554013" }, { "r": "4.6.0", "os": "mac", "version": "3.71.0", "date": "2026-05-11T10:09:34.000Z", "arch": "aarch64", "commit": "26dec9b1d61829abbbaf60c36bfd701b76735be3", "fileid": "7c405f657a3a4d22c3b155261d045987854795fa27095729848ab37af99d56e5", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25663554013" }, { "r": "4.6.0", "os": "mac", "version": "3.71.0", "date": "2026-05-11T10:10:06.000Z", "arch": "x86_64", "commit": "26dec9b1d61829abbbaf60c36bfd701b76735be3", "fileid": "617fc174a93b10a950e7b33850dced370822d36d0ccdbc4c0bb43a75b4d712c1", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25663554013" }, { "r": "4.7.0", "os": "win", "version": "3.71.0", "date": "2026-05-11T10:07:47.000Z", "arch": "x86_64", "commit": "26dec9b1d61829abbbaf60c36bfd701b76735be3", "fileid": "363ed7ba6e92a48d45aaf03dc349eb93e077ccfa4cccc5dc8699ac39fc98da50", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25663554013" }, { "r": "4.5.3", "os": "win", "version": "3.71.0", "date": "2026-05-11T10:07:43.000Z", "arch": "x86_64", "commit": "26dec9b1d61829abbbaf60c36bfd701b76735be3", "fileid": "6f95f21e73704a2e895b0acec3515a5cc5513840fcc4613e27667a6e82ab9c97", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25663554013" }, { "r": "4.6.0", "os": "win", "version": "3.71.0", "date": "2026-05-11T10:07:48.000Z", "arch": "x86_64", "commit": "26dec9b1d61829abbbaf60c36bfd701b76735be3", "fileid": "518fe9bba6ce96297ed026b4350c3402e418bee2b1982537228ecc248704f5c7", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25663554013" }, { "r": "4.6.0", "os": "wasm", "version": "3.71.0", "date": "2026-05-22T11:22:59.000Z", "arch": "emscripten", "commit": "26dec9b1d61829abbbaf60c36bfd701b76735be3", "fileid": "1f0605b95ffcbad5f5d3ec474dfadb1bbe94412cfcaf3810b66081985595a5cc", "status": "success", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25663554013" } ] }