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  "Title": "Inferring miRNA sponge modules in heterogeneous data",
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  "Authors@R": "person(given = \"Junpeng\",\nfamily = \"Zhang\",\nrole=c(\"aut\", \"cre\"),\nemail = \"zjp@dali.edu.cn\")",
  "Description": "The package aims to identify miRNA sponge or ceRNA modules\nin heterogeneous data. It provides several functions to study\nmiRNA sponge modules at single-sample and multi-sample levels,\nincluding popular methods for inferring gene modules (candidate\nmiRNA sponge or ceRNA modules), and two functions to identify\nmiRNA sponge modules at single-sample and multi-sample levels,\nas well as several functions to conduct modular analysis of\nmiRNA sponge modules.",
  "License": "GPL-3",
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  "Date/Publication": "2026-04-28 12:48:35 UTC",
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      "title": "miRSM: inferring miRNA sponge modules in heterogeneous data",
      "author": " Junpeng Zhang (zjp@dali.edu.cn) School of Engineering, Dali University",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Identification of gene modules",
        "Load BRCA sample data",
        "module_WGCNA",
        "module_GFA",
        "module_igraph",
        "module_ProNet",
        "module_NMF",
        "module_clust",
        "module_biclust",
        "Discovery of miRNA sponge modules",
        "Inference of sample-specific miRNA sponge modules",
        "Modular analysis of miRNA sponge modules",
        "Functional analysis of miRNA sponge modules",
        "Cancer enrichment analysis of miRNA sponge modules",
        "Validation of miRNA sponge interactions in miRNA sponge modules",
        "Co-expression analysis of miRNA sponge modules",
        "Distribution analysis of sharing miRNAs",
        "Predicting miRNA-target interactions",
        "Identifying miRNA sponge interactions",
        "Conclusions",
        "References",
        "Session information"
      ],
      "created": "2018-08-03 13:20:09",
      "modified": "2026-01-15 04:57:28",
      "commits": 29
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