{ "_id": "6a1ac3631d7bb097a09da4dc", "Package": "metagene2", "Version": "1.29.0", "Date": "2022-03-03", "Title": "A package to produce metagene plots", "Authors@R": "c(person(\"Eric\", \"Fournier\",\nemail=\"ericfournier2@yahoo.ca\",\nrole=c(\"cre\", \"aut\")),\nperson(\"Charles\", \"Joly Beauparlant\",\nemail=\"charles.joly-beauparlant@crchul.ulaval.ca\",\nrole=\"aut\"),\nperson(\"Cedric\", \"Lippens\",\nemail=\"lippens.cedric@protonmail.com\",\nrole=\"aut\"),\nperson(\"Arnaud\", \"Droit\",\nemail=\"arnaud.droit@crchuq.ulaval.ca\",\nrole=\"aut\"))", "Description": "This package produces metagene plots to compare coverages\nof sequencing experiments at selected groups of genomic\nregions. It can be used for such analyses as assessing the\nbinding of DNA-interacting proteins at promoter regions or\nsurveying antisense transcription over the length of a gene.\nThe metagene2 package can manage all aspects of the analysis,\nfrom normalization of coverages to plot facetting according to\nexperimental metadata. Bootstraping analysis is used to provide\nconfidence intervals of per-sample mean coverages.", "biocViews": "ChIPSeq, Genetics, MultipleComparison, Coverage, Alignment,\nSequencing", "License": "Artistic-2.0", "BugReports": "https://github.com/ArnaudDroitLab/metagene2/issues", "URL": "https://github.com/ArnaudDroitLab/metagene2", "VignetteBuilder": "knitr", "RoxygenNote": "7.1.1", "Config/pak/sysreqs": "make libbz2-dev libicu-dev liblzma-dev libxml2-dev\nlibssl-dev xz-utils zlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:50:10 UTC", "RemoteUrl": "https://github.com/bioc/metagene2", "RemoteRef": "HEAD", "RemoteSha": "433a7093e24c790994a9375730fb9a1644490c2a", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-30 07:38:36 UTC", "User": "root" }, "Author": "Eric Fournier [cre, aut],\nCharles Joly Beauparlant [aut],\nCedric Lippens [aut],\nArnaud Droit [aut]", "Maintainer": "Eric Fournier ", "MD5sum": "d2694247f9dc460b6399a86a1bd33201", 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