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This association is fundamental\nfor enrichment and semantic analyses. meshes supports\nenrichment analysis (over-representation and gene set\nenrichment analysis) of gene list or whole expression profile.\nThe semantic comparisons of MeSH terms provide quantitative\nways to compute similarities between genes and gene groups.\nmeshes implemented five methods proposed by Resnik, Schlicker,\nJiang, Lin and Wang respectively and supports more than 70\nspecies.", "VignetteBuilder": "knitr", "ByteCompile": "true", "License": "Artistic-2.0", "URL": "https://yulab-smu.top/biomedical-knowledge-mining-book/", "BugReports": "https://github.com/GuangchuangYu/meshes/issues", "biocViews": "Annotation, Clustering, MultipleComparison, Software", "Encoding": "UTF-8", "LazyData": "true", "RoxygenNote": "7.3.3", "Config/pak/sysreqs": "cmake make libicu-dev libpng-dev libuv1-dev\nlibssl-dev zlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:44:34 UTC", 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