{ "_id": "6a103ca0acfb0bcc41c9bfaa", "Package": "katdetectr", "Title": "Detection, Characterization and Visualization of Kataegis in\nSequencing Data", "Version": "1.15.0", "Date": "2023-02-14", "Authors@R": "c(\nperson(\"Daan\", \"Hazelaar\", , \"daanhazelaar@gmail.com\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-7513-6813\")),\nperson(\"Job\", \"van Riet\", , \"j.vanriet@erasmusmc.nl\", role = \"aut\",\ncomment = c(ORCID = \"0000-0001-7767-7923\")),\nperson(\"Harmen\", \"van de Werken\", , \"h.vandewerken@erasmusmc.nl\", role = \"ths\",\ncomment = c(ORCID = \"0000-0002-9794-1477\"))\n)", "Description": "Kataegis refers to the occurrence of regional\nhypermutation and is a phenomenon observed in a wide range of\nmalignancies. Using changepoint detection katdetectr aims to\nidentify putative kataegis foci from common data-formats\nhousing genomic variants. Katdetectr has shown to be a robust\npackage for the detection, characterization and visualization\nof kataegis.", "License": "GPL-3 + file LICENSE", "URL": "https://doi.org/doi:10.18129/B9.bioc.katdetectr", "BugReports": "https://github.com/ErasmusMC-CCBC/katdetectr/issues", "VignetteBuilder": "knitr", "RdMacros": "Rdpack", "biocViews": "WholeGenome, Software, SNP, Sequencing, Classification,\nVariantAnnotation", "Config/testthat/edition": "3", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.2.3", "Config/pak/sysreqs": "make libbz2-dev libicu-dev libjpeg-dev liblzma-dev\nlibpng-dev libxml2-dev libssl-dev xz-utils zlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:58:33 UTC", "RemoteUrl": "https://github.com/bioc/katdetectr", "RemoteRef": "HEAD", "RemoteSha": "b2135a5276bec5f2b5ab607efbb14c97578c47b3", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-11 10:10:16 UTC", "User": "root" }, "Author": "Daan Hazelaar 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