{
  "_id": "6a547cb2ff0138dec5d6410c",
  "Package": "iterativeBMA",
  "Type": "Package",
  "Title": "The Iterative Bayesian Model Averaging (BMA) algorithm",
  "Version": "1.71.0",
  "Date": "2009-7-22",
  "Author": "Ka Yee Yeung, University of Washington, Seattle, WA, with\ncontributions from Adrian Raftery and Ian Painter",
  "Maintainer": "Ka Yee Yeung <kayee@u.washington.edu>",
  "Description": "The iterative Bayesian Model Averaging (BMA) algorithm is\na variable selection and classification algorithm with an\napplication of classifying 2-class microarray samples, as\ndescribed in Yeung, Bumgarner and Raftery (Bioinformatics 2005,\n21: 2394-2402).",
  "License": "GPL (>= 2)",
  "URL": "http://faculty.washington.edu/kayee/research.html",
  "biocViews": "Microarray, Classification",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:33:04 UTC",
  "RemoteUrl": "https://github.com/bioc/iterativeBMA",
  "RemoteRef": "HEAD",
  "RemoteSha": "c138cdaea059d7886c4af7968db6c364ebc0e7a2",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-07-13 05:46:38 UTC",
    "User": "root"
  },
  "_user": "bioc",
  "_type": "src",
  "_file": "iterativeBMA_1.71.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/5f3ccc3f0bef53c0ff837ab71c98387fcf3005f7043413b5bdaa28385c178cf5",
  "_filesize": 297283,
  "_sha256": "5f3ccc3f0bef53c0ff837ab71c98387fcf3005f7043413b5bdaa28385c178cf5",
  "_expires": "2026-10-21T05:50:40.000Z",
  "_created": "2026-07-13T05:46:38.000Z",
  "_published": "2026-07-13T05:50:42.077Z",
  "_bioccheck": {
    "error": 1,
    "warning": 3,
    "note": 14
  },
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/29227017251",
  "_status": "success",
  "_upstream": "https://github.com/bioc/iterativeBMA",
  "_commit": {
    "id": "c138cdaea059d7886c4af7968db6c364ebc0e7a2",
    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777379584
  },
  "_maintainer": {
    "name": "Ka Yee Yeung",
    "email": "kayee@u.washington.edu"
  },
  "_distro": "resolute",
  "_jobs": [
    {
      "job": 86743568490,
      "time": 143,
      "config": "bioc-checks",
      "r": "4.6.1",
      "check": "ERROR",
      "artifact": "8270195947"
    },
    {
      "job": 86743568474,
      "time": 193,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "8270207991"
    },
    {
      "job": 86743568529,
      "time": 208,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8270211329"
    },
    {
      "job": 86743568505,
      "time": 105,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "8270186429"
    },
    {
      "job": 86743568502,
      "time": 108,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8270187105"
    },
    {
      "job": 86743198041,
      "time": 176,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8270159568"
    },
    {
      "job": 86743568503,
      "time": 116,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8270188668"
    },
    {
      "job": 86743568550,
      "time": 85,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "8270181782"
    },
    {
      "job": 86743568533,
      "time": 93,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "8270183414"
    },
    {
      "job": 86743568549,
      "time": 86,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8270181599"
    }
  ],
  "_registered": true,
  "_dependencies": [
    {
      "package": "BMA",
      "role": "Depends"
    },
    {
      "package": "leaps",
      "role": "Depends"
    },
    {
      "package": "Biobase",
      "version": ">= 2.5.5",
      "role": "Depends"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.71.0",
      "bioc": "3.24"
    },
    {
      "branch": "release",
      "version": "1.70.0",
      "bioc": "3.23"
    }
  ],
  "_topics": [
    "microarray",
    "classification"
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 446,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_downloads": {
    "count": 439,
    "source": "https://www.bioconductor.org/packages/stats/bioc/iterativeBMA"
  },
  "_mentions": 3,
  "_searchresults": 3,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/iterativeBMA.html",
    "manual.pdf"
  ],
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
    "bma.predict",
    "brier.score",
    "BssWssFast",
    "imageplot.iterate.bma",
    "iterateBMAglm.train",
    "iterateBMAglm.train.predict",
    "iterateBMAglm.train.predict.test",
    "iterateBMAglm.wrapper"
  ],
  "_datasets": [
    {
      "name": "testClass",
      "title": "Sample Test Data for the Iterative BMA Algorithm",
      "object": "testClass",
      "file": "testClass.RData",
      "class": [
        "numeric"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "testData",
      "title": "Sample Test Data for the Iterative BMA Algorithm",
      "object": "testData",
      "file": "testData.RData",
      "class": [
        "ExpressionSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "trainClass",
      "title": "Sample Training Data for the Iterative BMA Algorithm",
      "object": "trainClass",
      "file": "trainClass.RData",
      "class": [
        "numeric"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "trainData",
      "title": "Sample Training Data for the Iterative BMA Algorithm",
      "object": "trainData",
      "file": "trainData.RData",
      "class": [
        "ExpressionSet"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    }
  ],
  "_help": [
    {
      "page": "iterativeBMA-package",
      "title": "The Iterative Bayesian Model Averaging (BMA) algorithm",
      "topics": [
        "iterativeBMA-package",
        "iterativeBMA"
      ]
    },
    {
      "page": "bma_predict",
      "title": "Predicted Probabilities from Bayesian Model Averaging",
      "topics": [
        "bma.predict"
      ]
    },
    {
      "page": "brier_score",
      "title": "Brier Score: assessment of prediction accuracy",
      "topics": [
        "brier.score"
      ]
    },
    {
      "page": "BssWssFast",
      "title": "Between-groups sum-of-squares to within-groups sum-of-squares ratio",
      "topics": [
        "BssWssFast"
      ]
    },
    {
      "page": "imageplot_iterate_bma",
      "title": "An image plot visualization tool",
      "topics": [
        "imageplot.iterate.bma"
      ]
    },
    {
      "page": "iterateBMAglm_train",
      "title": "Iterative Bayesian Model Averaging: training step",
      "topics": [
        "iterateBMAglm.train"
      ]
    },
    {
      "page": "iterateBMAglm_train_predict",
      "title": "Iterative Bayesian Model Averaging: training and prediction",
      "topics": [
        "iterateBMAglm.train.predict"
      ]
    },
    {
      "page": "iterateBMAglm_train_predict_test",
      "title": "Iterative Bayesian Model Averaging: training, prediction and testing",
      "topics": [
        "iterateBMAglm.train.predict.test"
      ]
    },
    {
      "page": "iterateBMAglm_wrapper",
      "title": "Iterative Bayesian Model Averaging",
      "topics": [
        "iterateBMAglm.wrapper"
      ]
    },
    {
      "page": "testClass",
      "title": "Sample Test Data for the Iterative BMA Algorithm",
      "topics": [
        "testClass"
      ]
    },
    {
      "page": "testData",
      "title": "Sample Test Data for the Iterative BMA Algorithm",
      "topics": [
        "testData"
      ]
    },
    {
      "page": "trainClass",
      "title": "Sample Training Data for the Iterative BMA Algorithm",
      "topics": [
        "trainClass"
      ]
    },
    {
      "page": "trainData",
      "title": "Sample Training Data for the Iterative BMA Algorithm",
      "topics": [
        "trainData"
      ]
    }
  ],
  "_rundeps": [
    "Biobase",
    "BiocGenerics",
    "BMA",
    "DEoptimR",
    "generics",
    "inline",
    "lattice",
    "leaps",
    "Matrix",
    "mvtnorm",
    "pcaPP",
    "robustbase",
    "rrcov",
    "survival"
  ],
  "_vignettes": [
    {
      "source": "iterativeBMA.Rnw",
      "filename": "iterativeBMA.pdf",
      "title": "The Iterative Bayesian Model Averaging Algorithm",
      "engine": "utils::Sweave",
      "headings": [
        "Introduction",
        "Some examples"
      ],
      "created": "2013-11-01 20:04:32",
      "modified": "2013-11-01 20:04:32",
      "commits": 1
    }
  ],
  "_score": 3.778151250383644,
  "_indexed": true,
  "_nocasepkg": "iterativebma",
  "_universes": [
    "bioc"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.71.0",
      "date": "2026-07-13T05:49:36.000Z",
      "distro": "resolute",
      "commit": "c138cdaea059d7886c4af7968db6c364ebc0e7a2",
      "fileid": "https://r2.ropensci.org/f3afb9ba71edc18febcd060d8263cac6edb2c66248aef0dac8b242c0e681755a",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/29227017251"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.71.0",
      "date": "2026-07-13T05:49:49.000Z",
      "distro": "resolute",
      "commit": "c138cdaea059d7886c4af7968db6c364ebc0e7a2",
      "fileid": "https://r2.ropensci.org/a1a6b224b374f0f4674750ebb729d827d33f23bffa3dc89277005a7d7e840ecf",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/29227017251"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.71.0",
      "date": "2026-07-13T05:48:18.000Z",
      "commit": "c138cdaea059d7886c4af7968db6c364ebc0e7a2",
      "fileid": "https://r2.ropensci.org/91fa6bc4b92ce172eb6827fc5b2cecafd81d67a42d5ddbe6ae53fc3e780c5b6e",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/29227017251"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.71.0",
      "date": "2026-07-13T05:48:17.000Z",
      "commit": "c138cdaea059d7886c4af7968db6c364ebc0e7a2",
      "fileid": "https://r2.ropensci.org/35f0938bd16256494b6367c0b1805c859359a13ee382de3cd9904de538a66aff",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/29227017251"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.71.0",
      "date": "2026-07-13T05:48:47.000Z",
      "commit": "c138cdaea059d7886c4af7968db6c364ebc0e7a2",
      "fileid": "https://r2.ropensci.org/6c55511f8ab22ed8d6431279552ebe450f48278f8da3dd7c5e67d39ce86b3192",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/29227017251"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.71.0",
      "date": "2026-07-13T05:47:45.000Z",
      "commit": "c138cdaea059d7886c4af7968db6c364ebc0e7a2",
      "fileid": "https://r2.ropensci.org/483322cb44db0e64d68e4dc559b41a39a57a3f0be06af8064c716ddfd5b9a6e1",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/29227017251"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.71.0",
      "date": "2026-07-13T05:47:49.000Z",
      "commit": "c138cdaea059d7886c4af7968db6c364ebc0e7a2",
      "fileid": "https://r2.ropensci.org/e9de1073b8f17d1ec5a620cd2e26a7a06c05d4e906d478bbb351e1c1cc4064c9",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/29227017251"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.71.0",
      "date": "2026-07-13T05:47:44.000Z",
      "commit": "c138cdaea059d7886c4af7968db6c364ebc0e7a2",
      "fileid": "https://r2.ropensci.org/58d0f015539f0eb0caceb3ed4cae76b382650513b788d65c65f44fb0aeb26ae4",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/29227017251"
    }
  ]
}