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  "Package": "immunoClust",
  "Type": "Package",
  "Title": "immunoClust - Automated Pipeline for Population Detection in\nFlow Cytometry",
  "Version": "1.45.1",
  "Date": "2026-07-02",
  "Authors@R": "person(\"Till\", \"Soerensen\", email=\"till.soerensen@bioretis.com\",\nrole=c(\"aut\", \"cre\"))",
  "Maintainer": "Till Soerensen <till.soerensen@bioretis.com>",
  "Description": "immunoClust is a model based clustering approach for Flow\nCytometry samples. The cell-events of single Flow Cytometry\nsamples are modelled by a mixture of multinominal normal- or\nt-distributions. The cell-event clusters of several samples are\nmodelled by a mixture of multinominal normal-distributions\naiming stable co-clusters across these samples.",
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  "biocViews": "Clustering, FlowCytometry, SingleCell, CellBasedAssays,\nImmunoOncology",
  "License": "Artistic-2.0",
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  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-07-24 14:10:26 UTC",
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  "Author": "Till Soerensen [aut, cre]",
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  "_created": "2026-11-01T13:53:26.000Z",
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      "title": "immunoClust - Automated Pipeline for Population Detection in Flow Cytometry",
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        "immunoClust",
        "immunoClust.package"
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    {
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        "cell.InitialModel",
        "cell.MajorIterationLoop",
        "cell.MajorIterationTrans",
        "cell.process"
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      "title": "Brief Information of removed Cell-events by immunoClust Cell-event Clustering",
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      "title": "immunoClust Model Refinement Step in iterative Cell-events Clustering",
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      "title": "immunoClust Cell-clustering Sample",
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      "title": "immunoClust Meta-clustering Results Sample",
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        "show.immunoClust",
        "summary",
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        "summary.immunoClust"
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      "title": "'immunoMeta': a class for storing meta-clustering results",
      "topics": [
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        "immunoMeta-class",
        "immunoMeta-object",
        "immunoMeta.class",
        "immunoMeta.object",
        "show,immunoMeta-method",
        "show.immunoMeta",
        "summary,immunoMeta-method",
        "summary.immunoMeta"
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      "title": "Clustering of Cell-clusters in the immunoClust-pipeline",
      "topics": [
        "meta.Clustering"
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    },
    {
      "page": "meta.export",
      "title": "immunoClust Meta-clustering Results Export",
      "topics": [
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        "meta.freqTable",
        "meta.majorEvents",
        "meta.numClusters",
        "meta.numEvents",
        "meta.parMFI",
        "meta.relEvents",
        "meta.relEvents2",
        "meta.relEvents3",
        "meta.relParent"
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    {
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      "title": "Collecting Data of an immunoClust vector",
      "topics": [
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    },
    {
      "page": "meta.hclust",
      "title": "Hierarchical Meta-clustering of Cell-clusters in the immunoClust-pipeline",
      "topics": [
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    },
    {
      "page": "meta.ME",
      "title": "immunoClust EM(t)-iteration on Cell-clusters",
      "topics": [
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        "meta.Mstep"
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    },
    {
      "page": "meta.normalize",
      "title": "immunoClust normalization step with the meta.clustering process",
      "topics": [
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      "page": "meta.process",
      "title": "Meta-clustering of Cell-clusters in the immunoClust-pipeline",
      "topics": [
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    },
    {
      "page": "meta.regnorm",
      "title": "immunoClust normalization procedure",
      "topics": [
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    },
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      "page": "SON.clustering",
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    },
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      "page": "SON.combineClustering",
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      "topics": [
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    },
    {
      "page": "meta.SubClustering",
      "title": "immunoClust Model Refinement Step in iterative Meta-clustering",
      "topics": [
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        "meta.TestSubCluster"
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    },
    {
      "page": "immunoClust.methods",
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        "aposteriori.immunoClust",
        "cells",
        "cells,immunoClust-method",
        "events,immunoClust-method",
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      "topics": [
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        "addLevel<-.immunoMeta",
        "aposteriori,immunoMeta-method",
        "aposteriori.immunoMeta",
        "classified",
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    },
    {
      "page": "plot.immunoClust",
      "title": "Scatterplot of immunoClust Clustering Results",
      "topics": [
        "plot,immunoClust,missing-method",
        "plot,immunoClust-method",
        "plot.immunoClust"
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    },
    {
      "page": "plot.immunoMeta",
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      "topics": [
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        "plot,immunoMeta-method",
        "plot.immunoMeta"
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    },
    {
      "page": "splom.immunoClust",
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      "topics": [
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        "splom,immunoClust,missing-method",
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    {
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    },
    {
      "page": "trans.FitToData",
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      "topics": [
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      "filename": "immunoClust.pdf",
      "title": "immunoClust package",
      "engine": "utils::Sweave",
      "headings": [
        "1 Licensing",
        "2 Overview",
        "3 Getting started",
        "4 Example Illustrating the immunoClust Pipeline",
        "5 Session Info"
      ],
      "created": "2015-03-13 17:25:56",
      "modified": "2022-12-08 11:33:18",
      "commits": 11
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