{
  "_id": "6a630354d3420cf5dfdb5fec",
  "Package": "illuminaio",
  "Version": "0.55.0",
  "Title": "Parsing Illumina Microarray Output Files",
  "Description": "Tools for parsing Illumina's microarray output files,\nincluding IDAT.",
  "Authors@R": "c(person(\"Keith\", \"Baggerly\", role = \"aut\"),\nperson(\"Henrik\", \"Bengtsson\", role = \"aut\"),\nperson(c(\"Kasper\", \"Daniel\"), \"Hansen\", role = c(\"aut\", \"cre\"),\nemail = \"kasperdanielhansen@gmail.com\"),\nperson(\"Matt\", \"Ritchie\", role = \"aut\"),\nperson(c(\"Mike\", \"L.\"), \"Smith\", role = \"aut\"),\nperson(\"Tim\", \"Triche Jr.\", role = \"ctb\"))",
  "License": "GPL-2",
  "URL": "https://github.com/HenrikBengtsson/illuminaio",
  "BugReports": "https://github.com/HenrikBengtsson/illuminaio/issues",
  "biocViews": "Infrastructure, DataImport, Microarray, ProprietaryPlatforms",
  "Config/pak/sysreqs": "libssl-dev",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:37:02 UTC",
  "RemoteUrl": "https://github.com/bioc/illuminaio",
  "RemoteRef": "HEAD",
  "RemoteSha": "333376feb4348e023e00a231b1698b6f5faf4ef5",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-07-24 05:49:59 UTC",
    "User": "root"
  },
  "Author": "Keith Baggerly [aut],\nHenrik Bengtsson [aut],\nKasper Daniel Hansen [aut, cre],\nMatt Ritchie [aut],\nMike L. Smith [aut],\nTim Triche Jr. [ctb]",
  "Maintainer": "Kasper Daniel Hansen <kasperdanielhansen@gmail.com>",
  "_user": "bioc",
  "_type": "src",
  "_file": "illuminaio_0.55.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/20b85365443a512c92e5f544d3d10951602f4f0f67bb851062cede37cfa76ffb",
  "_filesize": 501453,
  "_sha256": "20b85365443a512c92e5f544d3d10951602f4f0f67bb851062cede37cfa76ffb",
  "_expires": "2026-11-01T06:16:50.000Z",
  "_created": "2026-07-24T05:49:59.000Z",
  "_published": "2026-07-24T06:16:52.550Z",
  "_bioccheck": {
    "error": 1,
    "warning": 4,
    "note": 9
  },
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/30070360532",
  "_status": "success",
  "_upstream": "https://github.com/bioc/illuminaio",
  "_commit": {
    "id": "333376feb4348e023e00a231b1698b6f5faf4ef5",
    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777379822
  },
  "_maintainer": {
    "name": "Kasper Daniel Hansen",
    "email": "kasperdanielhansen@gmail.com",
    "login": "kasperdanielhansen",
    "description": "Associate professor in Biostatistiscs @jhu. Research in statistical genomics.",
    "uuid": 4956575
  },
  "_distro": "resolute",
  "_jobs": [
    {
      "job": 89410213902,
      "time": 153,
      "config": "bioc-checks",
      "r": "4.6.1",
      "check": "ERROR",
      "artifact": "8587865601"
    },
    {
      "job": 89410213904,
      "time": 137,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8587860734"
    },
    {
      "job": 89410213945,
      "time": 149,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8587864346"
    },
    {
      "job": 89410213939,
      "time": 161,
      "config": "linux-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8587867585"
    },
    {
      "job": 89410213903,
      "time": 239,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8587890119"
    },
    {
      "job": 89410213921,
      "time": 120,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8588285390"
    },
    {
      "job": 89410213986,
      "time": 225,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8587946402"
    },
    {
      "job": 89410213927,
      "time": 112,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8588288783"
    },
    {
      "job": 89410213932,
      "time": 260,
      "config": "macos-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8587943959"
    },
    {
      "job": 89409783478,
      "time": 192,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8587821055"
    },
    {
      "job": 89410213867,
      "time": 105,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8587851457"
    },
    {
      "job": 89410213886,
      "time": 88,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8587846534"
    },
    {
      "job": 89410213940,
      "time": 80,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8587844494"
    },
    {
      "job": 89410213919,
      "time": 73,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8587842571"
    }
  ],
  "_registered": true,
  "_dependencies": [
    {
      "package": "base64",
      "role": "Imports"
    },
    {
      "package": "RUnit",
      "role": "Suggests"
    },
    {
      "package": "BiocGenerics",
      "role": "Suggests"
    },
    {
      "package": "IlluminaDataTestFiles",
      "version": ">= 1.0.2",
      "role": "Suggests"
    },
    {
      "package": "BiocStyle",
      "role": "Suggests"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 39,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "0.55.0",
      "bioc": "3.24"
    },
    {
      "branch": "release",
      "version": "0.54.0",
      "bioc": "3.23"
    }
  ],
  "_topics": [
    "infrastructure",
    "dataimport",
    "microarray",
    "proprietaryplatforms",
    "bioconductor"
  ],
  "_stars": 5,
  "_contributors": [
    {
      "user": "henrikbengtsson",
      "count": 114,
      "uuid": 1616850
    },
    {
      "user": "dtenenba",
      "count": 14,
      "uuid": 2286826
    },
    {
      "user": "nturaga",
      "count": 14,
      "uuid": 2746443
    },
    {
      "user": "kasperdanielhansen",
      "count": 3,
      "uuid": 4956575
    },
    {
      "user": "hpages",
      "count": 2,
      "uuid": 8810451
    },
    {
      "user": "jwokaty",
      "count": 2,
      "uuid": 1744257
    },
    {
      "user": "vobencha",
      "count": 2,
      "uuid": 2466173
    },
    {
      "user": "grimbough",
      "count": 1,
      "uuid": 971237
    }
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 451,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_downloads": {
    "count": 6108,
    "source": "https://www.bioconductor.org/packages/stats/bioc/illuminaio"
  },
  "_mentions": 12,
  "_devurl": "https://github.com/henrikbengtsson/illuminaio",
  "_searchresults": 93,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/illuminaio.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/henrikbengtsson/illuminaio",
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
    "readBGX",
    "readBPM",
    "readIDAT"
  ],
  "_help": [
    {
      "page": "readBGX",
      "title": "Low-level function to read BGX files",
      "topics": [
        "readBGX"
      ]
    },
    {
      "page": "readIDAT",
      "title": "Low-level function to read IDAT files",
      "topics": [
        "readIDAT"
      ]
    }
  ],
  "_readme": "https://github.com/bioc/illuminaio/raw/HEAD/README.md",
  "_rundeps": [
    "askpass",
    "base64",
    "openssl",
    "sys"
  ],
  "_vignettes": [
    {
      "source": "EncryptedFormat.Rnw",
      "filename": "EncryptedFormat.pdf",
      "title": "Description of Encrypted IDAT Format",
      "engine": "utils::Sweave",
      "headings": [],
      "created": "2013-09-13 15:29:25",
      "modified": "2019-08-31 01:04:03",
      "commits": 4
    },
    {
      "source": "illuminaio.Rnw",
      "filename": "illuminaio.pdf",
      "title": "Introduction to illuminaio",
      "engine": "utils::Sweave",
      "headings": [],
      "created": "2013-07-04 22:03:36",
      "modified": "2019-08-31 01:04:03",
      "commits": 8
    }
  ],
  "_score": 10.667665878698736,
  "_indexed": true,
  "_nocasepkg": "illuminaio",
  "_universes": [
    "bioc",
    "kasperdanielhansen",
    "henrikbengtsson"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.55.0",
      "date": "2026-07-24T05:52:22.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "333376feb4348e023e00a231b1698b6f5faf4ef5",
      "fileid": "https://r2.ropensci.org/37485555820c1ba9ea523f010a8a3e7ad156cda811232b44479fc464124382c3",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/30070360532"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.55.0",
      "date": "2026-07-24T05:52:30.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "333376feb4348e023e00a231b1698b6f5faf4ef5",
      "fileid": "https://r2.ropensci.org/69bd2cda5df5c2cf2307cb0ce057d841acacd93f58c537feca1aafec4dafea7b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/30070360532"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.55.0",
      "date": "2026-07-24T05:52:43.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "333376feb4348e023e00a231b1698b6f5faf4ef5",
      "fileid": "https://r2.ropensci.org/f46f4d081cf3a6b4ebc9dde8474771617a5de8efcb94dd81e4b4da1abeec73db",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/30070360532"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.55.0",
      "date": "2026-07-24T05:53:57.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "333376feb4348e023e00a231b1698b6f5faf4ef5",
      "fileid": "https://r2.ropensci.org/3c85d8fbca214741931e014fd1f5e89fb693344ef883b0b18b6f1cbf466d2f46",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/30070360532"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.55.0",
      "date": "2026-07-24T06:16:01.000Z",
      "arch": "aarch64",
      "commit": "333376feb4348e023e00a231b1698b6f5faf4ef5",
      "fileid": "https://r2.ropensci.org/39c93bd207158316d5877e19da604ce46b37929fec0dbbf947ad116496da4b4c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/30070360532"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.55.0",
      "date": "2026-07-24T05:57:06.000Z",
      "arch": "x86_64",
      "commit": "333376feb4348e023e00a231b1698b6f5faf4ef5",
      "fileid": "https://r2.ropensci.org/5096a69fdc261540a09f74c3a598dd6bc9fd8842ab8758225afb040d49de774f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/30070360532"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.55.0",
      "date": "2026-07-24T06:16:11.000Z",
      "arch": "aarch64",
      "commit": "333376feb4348e023e00a231b1698b6f5faf4ef5",
      "fileid": "https://r2.ropensci.org/1a1c8f0e03d37fcd0dfdef350a7614e3d742ba7dfee1a67d44c85b1cdaf47b2b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/30070360532"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.55.0",
      "date": "2026-07-24T05:56:54.000Z",
      "arch": "x86_64",
      "commit": "333376feb4348e023e00a231b1698b6f5faf4ef5",
      "fileid": "https://r2.ropensci.org/f2ff9754c01f88992214dcc5df2d3240d6408e904b1df0fc9e00e23137535389",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/30070360532"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.55.0",
      "date": "2026-07-24T05:52:01.000Z",
      "arch": "emscripten",
      "commit": "333376feb4348e023e00a231b1698b6f5faf4ef5",
      "fileid": "https://r2.ropensci.org/061fec4cd0ce6740c78833aa7e49d8b2d9219bd92e79eb9a9b8998a92e35189c",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/30070360532"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.55.0",
      "date": "2026-07-24T05:51:16.000Z",
      "arch": "x86_64",
      "commit": "333376feb4348e023e00a231b1698b6f5faf4ef5",
      "fileid": "https://r2.ropensci.org/756b26742d7faefc87208c718336ced7f30fe74ccca9734cc4007d7bbc020ed6",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/30070360532"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.55.0",
      "date": "2026-07-24T05:51:09.000Z",
      "arch": "x86_64",
      "commit": "333376feb4348e023e00a231b1698b6f5faf4ef5",
      "fileid": "https://r2.ropensci.org/5682607d8530a9dcd00443e6efdad8cf6b4cb36424e89cc0f9ca1561c6ce7a28",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/30070360532"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.55.0",
      "date": "2026-07-24T05:51:03.000Z",
      "arch": "x86_64",
      "commit": "333376feb4348e023e00a231b1698b6f5faf4ef5",
      "fileid": "https://r2.ropensci.org/f8404aba062fc531e06e2ffce878a4f9b5d86b6b9525e5685fa495459538d7d1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/30070360532"
    }
  ]
}