{
  "_id": "6a1acb231d7bb097a09ddd98",
  "Package": "hierGWAS",
  "Title": "Asessing statistical significance in predictive GWA studies",
  "Version": "1.43.0",
  "Author": "Laura Buzdugan",
  "Maintainer": "Laura Buzdugan <buzdugan@stat.math.ethz.ch>",
  "Description": "Testing individual SNPs, as well as arbitrarily large\ngroups of SNPs in GWA studies, using a joint model of all SNPs.\nThe method controls the FWER, and provides an automatic,\ndata-driven refinement of the SNP clusters to smaller groups or\nsingle markers.",
  "License": "GPL-3",
  "LazyData": "true",
  "biocViews": "SNP, LinkageDisequilibrium, Clustering",
  "Collate": "'cluster.snp.R' 'lasso.select.R' 'multisplit.R' 'MEL.R'\n'test.snp.R' 'adj.pval.R' 'comp.cluster.pval.R'\n'iterative.DFS.R' 'test.hierarchy.R' 'return.r2.R'\n'compute.r2.R'",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:41:24 UTC",
  "RemoteUrl": "https://github.com/bioc/hierGWAS",
  "RemoteRef": "HEAD",
  "RemoteSha": "ff417c38bc2c855f4e323e88013dfe8166ea529c",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-30 08:00:14 UTC",
    "User": "root"
  },
  "MD5sum": "323a1a0b07b9a4d654419ac529edd6e1",
  "_user": "bioc",
  "_type": "src",
  "_file": "hierGWAS_1.43.0.tar.gz",
  "_fileid": "dd38bcdea41841ddd45a5453583001553406d971e6a6659b8b1d56c4aca73e35",
  "_filesize": 542813,
  "_sha256": "dd38bcdea41841ddd45a5453583001553406d971e6a6659b8b1d56c4aca73e35",
  "_created": "2026-05-30T08:00:14.000Z",
  "_published": "2026-05-30T11:33:55.259Z",
  "_jobs": [
    {
      "job": 78635155087,
      "time": 158,
      "config": "bioc-checks",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "7306680531"
    },
    {
      "job": 78635155082,
      "time": 187,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7306683310"
    },
    {
      "job": 78635155092,
      "time": 246,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7306688902"
    },
    {
      "job": 78635155091,
      "time": 138,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7307874735"
    },
    {
      "job": 78635155109,
      "time": 129,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7307873387"
    },
    {
      "job": 78634935354,
      "time": 253,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7306664367"
    },
    {
      "job": 78635155105,
      "time": 92,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7306674210"
    },
    {
      "job": 78635155110,
      "time": 99,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7306675462"
    },
    {
      "job": 78635155128,
      "time": 85,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7306673478"
    },
    {
      "job": 78635155099,
      "time": 90,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7306673983"
    }
  ],
  "_bioccheck": {
    "error": 1,
    "warning": 2,
    "note": 10
  },
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/26678612075",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/bioc/hierGWAS",
  "_commit": {
    "id": "ff417c38bc2c855f4e323e88013dfe8166ea529c",
    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777380084
  },
  "_maintainer": {
    "name": "Laura Buzdugan",
    "email": "buzdugan@stat.math.ethz.ch"
  },
  "_distro": "noble",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.2.0",
      "role": "Depends"
    },
    {
      "package": "fastcluster",
      "role": "Imports"
    },
    {
      "package": "glmnet",
      "role": "Imports"
    },
    {
      "package": "fmsb",
      "role": "Imports"
    },
    {
      "package": "BiocGenerics",
      "role": "Suggests"
    },
    {
      "package": "RUnit",
      "role": "Suggests"
    },
    {
      "package": "MASS",
      "role": "Suggests"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.43.0",
      "bioc": "3.24"
    },
    {
      "branch": "release",
      "version": "1.42.0",
      "bioc": "3.23"
    }
  ],
  "_topics": [
    "snp",
    "linkagedisequilibrium",
    "clustering"
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_downloads": {
    "count": 380,
    "source": "https://www.bioconductor.org/packages/stats/bioc/hierGWAS"
  },
  "_searchresults": 1,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/hierGWAS.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "manual.pdf"
  ],
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
    "cluster.snp",
    "compute.r2",
    "multisplit",
    "test.hierarchy"
  ],
  "_datasets": [
    {
      "name": "simGWAS",
      "title": "Simulated GWAS data",
      "object": "simGWAS",
      "class": [
        "data.frame"
      ],
      "fields": [
        "SNP.1",
        "SNP.2",
        "SNP.3",
        "SNP.4",
        "SNP.5",
        "SNP.6",
        "SNP.7",
        "SNP.8",
        "SNP.9",
        "SNP.10",
        "SNP.11",
        "SNP.12",
        "SNP.13",
        "SNP.14",
        "SNP.15",
        "SNP.16",
        "SNP.17",
        "SNP.18",
        "SNP.19",
        "SNP.20",
        "SNP.21",
        "SNP.22",
        "SNP.23",
        "SNP.24",
        "SNP.25",
        "SNP.26",
        "SNP.27",
        "SNP.28",
        "SNP.29",
        "SNP.30",
        "SNP.31",
        "SNP.32",
        "SNP.33",
        "SNP.34",
        "SNP.35",
        "SNP.36",
        "SNP.37",
        "SNP.38",
        "SNP.39",
        "SNP.40",
        "SNP.41",
        "SNP.42",
        "SNP.43",
        "SNP.44",
        "SNP.45",
        "SNP.46",
        "SNP.47",
        "SNP.48",
        "SNP.49",
        "SNP.50",
        "SNP.51",
        "SNP.52",
        "SNP.53",
        "SNP.54",
        "SNP.55",
        "SNP.56",
        "SNP.57",
        "SNP.58",
        "SNP.59",
        "SNP.60",
        "SNP.61",
        "SNP.62",
        "SNP.63",
        "SNP.64",
        "SNP.65",
        "SNP.66",
        "SNP.67",
        "SNP.68",
        "SNP.69",
        "SNP.70",
        "SNP.71",
        "SNP.72",
        "SNP.73",
        "SNP.74",
        "SNP.75",
        "SNP.76",
        "SNP.77",
        "SNP.78",
        "SNP.79",
        "SNP.80",
        "SNP.81",
        "SNP.82",
        "SNP.83",
        "SNP.84",
        "SNP.85",
        "SNP.86",
        "SNP.87",
        "SNP.88",
        "SNP.89",
        "SNP.90",
        "SNP.91",
        "SNP.92",
        "SNP.93",
        "SNP.94",
        "SNP.95",
        "SNP.96",
        "SNP.97",
        "SNP.98",
        "SNP.99",
        "SNP.100",
        "SNP.101",
        "SNP.102",
        "SNP.103",
        "SNP.104",
        "SNP.105",
        "SNP.106",
        "SNP.107",
        "SNP.108",
        "SNP.109",
        "SNP.110",
        "SNP.111",
        "SNP.112",
        "SNP.113",
        "SNP.114",
        "SNP.115",
        "SNP.116",
        "SNP.117",
        "SNP.118",
        "SNP.119",
        "SNP.120",
        "SNP.121",
        "SNP.122",
        "SNP.123",
        "SNP.124",
        "SNP.125",
        "SNP.126",
        "SNP.127",
        "SNP.128",
        "SNP.129",
        "SNP.130",
        "SNP.131",
        "SNP.132",
        "SNP.133",
        "SNP.134",
        "SNP.135",
        "SNP.136",
        "SNP.137",
        "SNP.138",
        "SNP.139",
        "SNP.140",
        "SNP.141",
        "SNP.142",
        "SNP.143",
        "SNP.144",
        "SNP.145",
        "SNP.146",
        "SNP.147",
        "SNP.148",
        "SNP.149",
        "SNP.150",
        "SNP.151",
        "SNP.152",
        "SNP.153",
        "SNP.154",
        "SNP.155",
        "SNP.156",
        "SNP.157",
        "SNP.158",
        "SNP.159",
        "SNP.160",
        "SNP.161",
        "SNP.162",
        "SNP.163",
        "SNP.164",
        "SNP.165",
        "SNP.166",
        "SNP.167",
        "SNP.168",
        "SNP.169",
        "SNP.170",
        "SNP.171",
        "SNP.172",
        "SNP.173",
        "SNP.174",
        "SNP.175",
        "SNP.176",
        "SNP.177",
        "SNP.178",
        "SNP.179",
        "SNP.180",
        "SNP.181",
        "SNP.182",
        "SNP.183",
        "SNP.184",
        "SNP.185",
        "SNP.186",
        "SNP.187",
        "SNP.188",
        "SNP.189",
        "SNP.190",
        "SNP.191",
        "SNP.192",
        "SNP.193",
        "SNP.194",
        "SNP.195",
        "SNP.196",
        "SNP.197",
        "SNP.198",
        "SNP.199",
        "SNP.200",
        "SNP.201",
        "SNP.202",
        "SNP.203",
        "SNP.204",
        "SNP.205",
        "SNP.206",
        "SNP.207",
        "SNP.208",
        "SNP.209",
        "SNP.210",
        "SNP.211",
        "SNP.212",
        "SNP.213",
        "SNP.214",
        "SNP.215",
        "SNP.216",
        "SNP.217",
        "SNP.218",
        "SNP.219",
        "SNP.220",
        "SNP.221",
        "SNP.222",
        "SNP.223",
        "SNP.224",
        "SNP.225",
        "SNP.226",
        "SNP.227",
        "SNP.228",
        "SNP.229",
        "SNP.230",
        "SNP.231",
        "SNP.232",
        "SNP.233",
        "SNP.234",
        "SNP.235",
        "SNP.236",
        "SNP.237",
        "SNP.238",
        "SNP.239",
        "SNP.240",
        "SNP.241",
        "SNP.242",
        "SNP.243",
        "SNP.244",
        "SNP.245",
        "SNP.246",
        "SNP.247",
        "SNP.248",
        "SNP.249",
        "SNP.250",
        "SNP.251",
        "SNP.252",
        "SNP.253",
        "SNP.254",
        "SNP.255",
        "SNP.256",
        "SNP.257",
        "SNP.258",
        "SNP.259",
        "SNP.260",
        "SNP.261",
        "SNP.262",
        "SNP.263",
        "SNP.264",
        "SNP.265",
        "SNP.266",
        "SNP.267",
        "SNP.268",
        "SNP.269",
        "SNP.270",
        "SNP.271",
        "SNP.272",
        "SNP.273",
        "SNP.274",
        "SNP.275",
        "SNP.276",
        "SNP.277",
        "SNP.278",
        "SNP.279",
        "SNP.280",
        "SNP.281",
        "SNP.282",
        "SNP.283",
        "SNP.284",
        "SNP.285",
        "SNP.286",
        "SNP.287",
        "SNP.288",
        "SNP.289",
        "SNP.290",
        "SNP.291",
        "SNP.292",
        "SNP.293",
        "SNP.294",
        "SNP.295",
        "SNP.296",
        "SNP.297",
        "SNP.298",
        "SNP.299",
        "SNP.300",
        "SNP.301",
        "SNP.302",
        "SNP.303",
        "SNP.304",
        "SNP.305",
        "SNP.306",
        "SNP.307",
        "SNP.308",
        "SNP.309",
        "SNP.310",
        "SNP.311",
        "SNP.312",
        "SNP.313",
        "SNP.314",
        "SNP.315",
        "SNP.316",
        "SNP.317",
        "SNP.318",
        "SNP.319",
        "SNP.320",
        "SNP.321",
        "SNP.322",
        "SNP.323",
        "SNP.324",
        "SNP.325",
        "SNP.326",
        "SNP.327",
        "SNP.328",
        "SNP.329",
        "SNP.330",
        "SNP.331",
        "SNP.332",
        "SNP.333",
        "SNP.334",
        "SNP.335",
        "SNP.336",
        "SNP.337",
        "SNP.338",
        "SNP.339",
        "SNP.340",
        "SNP.341",
        "SNP.342",
        "SNP.343",
        "SNP.344",
        "SNP.345",
        "SNP.346",
        "SNP.347",
        "SNP.348",
        "SNP.349",
        "SNP.350",
        "SNP.351",
        "SNP.352",
        "SNP.353",
        "SNP.354",
        "SNP.355",
        "SNP.356",
        "SNP.357",
        "SNP.358",
        "SNP.359",
        "SNP.360",
        "SNP.361",
        "SNP.362",
        "SNP.363",
        "SNP.364",
        "SNP.365",
        "SNP.366",
        "SNP.367",
        "SNP.368",
        "SNP.369",
        "SNP.370",
        "SNP.371",
        "SNP.372",
        "SNP.373",
        "SNP.374",
        "SNP.375",
        "SNP.376",
        "SNP.377",
        "SNP.378",
        "SNP.379",
        "SNP.380",
        "SNP.381",
        "SNP.382",
        "SNP.383",
        "SNP.384",
        "SNP.385",
        "SNP.386",
        "SNP.387",
        "SNP.388",
        "SNP.389",
        "SNP.390",
        "SNP.391",
        "SNP.392",
        "SNP.393",
        "SNP.394",
        "SNP.395",
        "SNP.396",
        "SNP.397",
        "SNP.398",
        "SNP.399",
        "SNP.400",
        "SNP.401",
        "SNP.402",
        "SNP.403",
        "SNP.404",
        "SNP.405",
        "SNP.406",
        "SNP.407",
        "SNP.408",
        "SNP.409",
        "SNP.410",
        "SNP.411",
        "SNP.412",
        "SNP.413",
        "SNP.414",
        "SNP.415",
        "SNP.416",
        "SNP.417",
        "SNP.418",
        "SNP.419",
        "SNP.420",
        "SNP.421",
        "SNP.422",
        "SNP.423",
        "SNP.424",
        "SNP.425",
        "SNP.426",
        "SNP.427",
        "SNP.428",
        "SNP.429",
        "SNP.430",
        "SNP.431",
        "SNP.432",
        "SNP.433",
        "SNP.434",
        "SNP.435",
        "SNP.436",
        "SNP.437",
        "SNP.438",
        "SNP.439",
        "SNP.440",
        "SNP.441",
        "SNP.442",
        "SNP.443",
        "SNP.444",
        "SNP.445",
        "SNP.446",
        "SNP.447",
        "SNP.448",
        "SNP.449",
        "SNP.450",
        "SNP.451",
        "SNP.452",
        "SNP.453",
        "SNP.454",
        "SNP.455",
        "SNP.456",
        "SNP.457",
        "SNP.458",
        "SNP.459",
        "SNP.460",
        "SNP.461",
        "SNP.462",
        "SNP.463",
        "SNP.464",
        "SNP.465",
        "SNP.466",
        "SNP.467",
        "SNP.468",
        "SNP.469",
        "SNP.470",
        "SNP.471",
        "SNP.472",
        "SNP.473",
        "SNP.474",
        "SNP.475",
        "SNP.476",
        "SNP.477",
        "SNP.478",
        "SNP.479",
        "SNP.480",
        "SNP.481",
        "SNP.482",
        "SNP.483",
        "SNP.484",
        "SNP.485",
        "SNP.486",
        "SNP.487",
        "SNP.488",
        "SNP.489",
        "SNP.490",
        "SNP.491",
        "SNP.492",
        "SNP.493",
        "SNP.494",
        "SNP.495",
        "SNP.496",
        "SNP.497",
        "SNP.498",
        "SNP.499",
        "SNP.500",
        "SNP.501",
        "SNP.502",
        "SNP.503",
        "SNP.504",
        "SNP.505",
        "SNP.506",
        "SNP.507",
        "SNP.508",
        "SNP.509",
        "SNP.510",
        "SNP.511",
        "SNP.512",
        "SNP.513",
        "SNP.514",
        "SNP.515",
        "SNP.516",
        "SNP.517",
        "SNP.518",
        "SNP.519",
        "SNP.520",
        "SNP.521",
        "SNP.522",
        "SNP.523",
        "SNP.524",
        "SNP.525",
        "SNP.526",
        "SNP.527",
        "SNP.528",
        "SNP.529",
        "SNP.530",
        "SNP.531",
        "SNP.532",
        "SNP.533",
        "SNP.534",
        "SNP.535",
        "SNP.536",
        "SNP.537",
        "SNP.538",
        "SNP.539",
        "SNP.540",
        "SNP.541",
        "SNP.542",
        "SNP.543",
        "SNP.544",
        "SNP.545",
        "SNP.546",
        "SNP.547",
        "SNP.548",
        "SNP.549",
        "SNP.550",
        "SNP.551",
        "SNP.552",
        "SNP.553",
        "SNP.554",
        "SNP.555",
        "SNP.556",
        "SNP.557",
        "SNP.558",
        "SNP.559",
        "SNP.560",
        "SNP.561",
        "SNP.562",
        "SNP.563",
        "SNP.564",
        "SNP.565",
        "SNP.566",
        "SNP.567",
        "SNP.568",
        "SNP.569",
        "SNP.570",
        "SNP.571",
        "SNP.572",
        "SNP.573",
        "SNP.574",
        "SNP.575",
        "SNP.576",
        "SNP.577",
        "SNP.578",
        "SNP.579",
        "SNP.580",
        "SNP.581",
        "SNP.582",
        "SNP.583",
        "SNP.584",
        "SNP.585",
        "SNP.586",
        "SNP.587",
        "SNP.588",
        "SNP.589",
        "SNP.590",
        "SNP.591",
        "SNP.592",
        "SNP.593",
        "SNP.594",
        "SNP.595",
        "SNP.596",
        "SNP.597",
        "SNP.598",
        "SNP.599",
        "SNP.600",
        "SNP.601",
        "SNP.602",
        "SNP.603",
        "SNP.604",
        "SNP.605",
        "SNP.606",
        "SNP.607",
        "SNP.608",
        "SNP.609",
        "SNP.610",
        "SNP.611",
        "SNP.612",
        "SNP.613",
        "SNP.614",
        "SNP.615",
        "SNP.616",
        "SNP.617",
        "SNP.618",
        "SNP.619",
        "SNP.620",
        "SNP.621",
        "SNP.622",
        "SNP.623",
        "SNP.624",
        "SNP.625",
        "SNP.626",
        "SNP.627",
        "SNP.628",
        "SNP.629",
        "SNP.630",
        "SNP.631",
        "SNP.632",
        "SNP.633",
        "SNP.634",
        "SNP.635",
        "SNP.636",
        "SNP.637",
        "SNP.638",
        "SNP.639",
        "SNP.640",
        "SNP.641",
        "SNP.642",
        "SNP.643",
        "SNP.644",
        "SNP.645",
        "SNP.646",
        "SNP.647",
        "SNP.648",
        "SNP.649",
        "SNP.650",
        "SNP.651",
        "SNP.652",
        "SNP.653",
        "SNP.654",
        "SNP.655",
        "SNP.656",
        "SNP.657",
        "SNP.658",
        "SNP.659",
        "SNP.660",
        "SNP.661",
        "SNP.662",
        "SNP.663",
        "SNP.664",
        "SNP.665",
        "SNP.666",
        "SNP.667",
        "SNP.668",
        "SNP.669",
        "SNP.670",
        "SNP.671",
        "SNP.672",
        "SNP.673",
        "SNP.674",
        "SNP.675",
        "SNP.676",
        "SNP.677",
        "SNP.678",
        "SNP.679",
        "SNP.680",
        "SNP.681",
        "SNP.682",
        "SNP.683",
        "SNP.684",
        "SNP.685",
        "SNP.686",
        "SNP.687",
        "SNP.688",
        "SNP.689",
        "SNP.690",
        "SNP.691",
        "SNP.692",
        "SNP.693",
        "SNP.694",
        "SNP.695",
        "SNP.696",
        "SNP.697",
        "SNP.698",
        "SNP.699",
        "SNP.700",
        "SNP.701",
        "SNP.702",
        "SNP.703",
        "SNP.704",
        "SNP.705",
        "SNP.706",
        "SNP.707",
        "SNP.708",
        "SNP.709",
        "SNP.710",
        "SNP.711",
        "SNP.712",
        "SNP.713",
        "SNP.714",
        "SNP.715",
        "SNP.716",
        "SNP.717",
        "SNP.718",
        "SNP.719",
        "SNP.720",
        "SNP.721",
        "SNP.722",
        "SNP.723",
        "SNP.724",
        "SNP.725",
        "SNP.726",
        "SNP.727",
        "SNP.728",
        "SNP.729",
        "SNP.730",
        "SNP.731",
        "SNP.732",
        "SNP.733",
        "SNP.734",
        "SNP.735",
        "SNP.736",
        "SNP.737",
        "SNP.738",
        "SNP.739",
        "SNP.740",
        "SNP.741",
        "SNP.742",
        "SNP.743",
        "SNP.744",
        "SNP.745",
        "SNP.746",
        "SNP.747",
        "SNP.748",
        "SNP.749",
        "SNP.750",
        "SNP.751",
        "SNP.752",
        "SNP.753",
        "SNP.754",
        "SNP.755",
        "SNP.756",
        "SNP.757",
        "SNP.758",
        "SNP.759",
        "SNP.760",
        "SNP.761",
        "SNP.762",
        "SNP.763",
        "SNP.764",
        "SNP.765",
        "SNP.766",
        "SNP.767",
        "SNP.768",
        "SNP.769",
        "SNP.770",
        "SNP.771",
        "SNP.772",
        "SNP.773",
        "SNP.774",
        "SNP.775",
        "SNP.776",
        "SNP.777",
        "SNP.778",
        "SNP.779",
        "SNP.780",
        "SNP.781",
        "SNP.782",
        "SNP.783",
        "SNP.784",
        "SNP.785",
        "SNP.786",
        "SNP.787",
        "SNP.788",
        "SNP.789",
        "SNP.790",
        "SNP.791",
        "SNP.792",
        "SNP.793",
        "SNP.794",
        "SNP.795",
        "SNP.796",
        "SNP.797",
        "SNP.798",
        "SNP.799",
        "SNP.800",
        "SNP.801",
        "SNP.802",
        "SNP.803",
        "SNP.804",
        "SNP.805",
        "SNP.806",
        "SNP.807",
        "SNP.808",
        "SNP.809",
        "SNP.810",
        "SNP.811",
        "SNP.812",
        "SNP.813",
        "SNP.814",
        "SNP.815",
        "SNP.816",
        "SNP.817",
        "SNP.818",
        "SNP.819",
        "SNP.820",
        "SNP.821",
        "SNP.822",
        "SNP.823",
        "SNP.824",
        "SNP.825",
        "SNP.826",
        "SNP.827",
        "SNP.828",
        "SNP.829",
        "SNP.830",
        "SNP.831",
        "SNP.832",
        "SNP.833",
        "SNP.834",
        "SNP.835",
        "SNP.836",
        "SNP.837",
        "SNP.838",
        "SNP.839",
        "SNP.840",
        "SNP.841",
        "SNP.842",
        "SNP.843",
        "SNP.844",
        "SNP.845",
        "SNP.846",
        "SNP.847",
        "SNP.848",
        "SNP.849",
        "SNP.850",
        "SNP.851",
        "SNP.852",
        "SNP.853",
        "SNP.854",
        "SNP.855",
        "SNP.856",
        "SNP.857",
        "SNP.858",
        "SNP.859",
        "SNP.860",
        "SNP.861",
        "SNP.862",
        "SNP.863",
        "SNP.864",
        "SNP.865",
        "SNP.866",
        "SNP.867",
        "SNP.868",
        "SNP.869",
        "SNP.870",
        "SNP.871",
        "SNP.872",
        "SNP.873",
        "SNP.874",
        "SNP.875",
        "SNP.876",
        "SNP.877",
        "SNP.878",
        "SNP.879",
        "SNP.880",
        "SNP.881",
        "SNP.882",
        "SNP.883",
        "SNP.884",
        "SNP.885",
        "SNP.886",
        "SNP.887",
        "SNP.888",
        "SNP.889",
        "SNP.890",
        "SNP.891",
        "SNP.892",
        "SNP.893",
        "SNP.894",
        "SNP.895",
        "SNP.896",
        "SNP.897",
        "SNP.898",
        "SNP.899",
        "SNP.900",
        "SNP.901",
        "SNP.902",
        "SNP.903",
        "SNP.904",
        "SNP.905",
        "SNP.906",
        "SNP.907",
        "SNP.908",
        "SNP.909",
        "SNP.910",
        "SNP.911",
        "SNP.912",
        "SNP.913",
        "SNP.914",
        "SNP.915",
        "SNP.916",
        "SNP.917",
        "SNP.918",
        "SNP.919",
        "SNP.920",
        "SNP.921",
        "SNP.922",
        "SNP.923",
        "SNP.924",
        "SNP.925",
        "SNP.926",
        "SNP.927",
        "SNP.928",
        "SNP.929",
        "SNP.930",
        "SNP.931",
        "SNP.932",
        "SNP.933",
        "SNP.934",
        "SNP.935",
        "SNP.936",
        "SNP.937",
        "SNP.938",
        "SNP.939",
        "SNP.940",
        "SNP.941",
        "SNP.942",
        "SNP.943",
        "SNP.944",
        "SNP.945",
        "SNP.946",
        "SNP.947",
        "SNP.948",
        "SNP.949",
        "SNP.950",
        "SNP.951",
        "SNP.952",
        "SNP.953",
        "SNP.954",
        "SNP.955",
        "SNP.956",
        "SNP.957",
        "SNP.958",
        "SNP.959",
        "SNP.960",
        "SNP.961",
        "SNP.962",
        "SNP.963",
        "SNP.964",
        "SNP.965",
        "SNP.966",
        "SNP.967",
        "SNP.968",
        "SNP.969",
        "SNP.970",
        "SNP.971",
        "SNP.972",
        "SNP.973",
        "SNP.974",
        "SNP.975",
        "SNP.976",
        "SNP.977",
        "SNP.978",
        "SNP.979",
        "SNP.980",
        "SNP.981",
        "SNP.982",
        "SNP.983",
        "SNP.984",
        "SNP.985",
        "SNP.986",
        "SNP.987",
        "SNP.988",
        "SNP.989",
        "SNP.990",
        "SNP.991",
        "SNP.992",
        "SNP.993",
        "SNP.994",
        "SNP.995",
        "SNP.996",
        "SNP.997",
        "SNP.998",
        "SNP.999",
        "SNP.1000",
        "y",
        "sex",
        "age"
      ],
      "rows": 500,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "cluster.snp",
      "title": "Hierarchical Clustering of SNP Data",
      "topics": [
        "cluster.snp"
      ]
    },
    {
      "page": "compute.r2",
      "title": "R2 computation",
      "topics": [
        "compute.r2"
      ]
    },
    {
      "page": "hierGWAS",
      "title": "Asessing statistical significance in predictive GWA studies",
      "topics": [
        "hierGWAS-package",
        "hierGWAS"
      ]
    },
    {
      "page": "multisplit",
      "title": "Variable Selection on Random Sample Splits.",
      "topics": [
        "multisplit"
      ]
    },
    {
      "page": "simGWAS",
      "title": "Simulated GWAS data",
      "topics": [
        "simGWAS"
      ]
    },
    {
      "page": "test.hierarchy",
      "title": "Hierarchical Testing of SNPs",
      "topics": [
        "test.hierarchy"
      ]
    }
  ],
  "_rundeps": [
    "codetools",
    "fastcluster",
    "fmsb",
    "foreach",
    "glmnet",
    "iterators",
    "lattice",
    "Matrix",
    "Rcpp",
    "RcppEigen",
    "shape",
    "survival"
  ],
  "_vignettes": [
    {
      "source": "hierGWAS.Rnw",
      "filename": "hierGWAS.pdf",
      "title": "User manual for R-Package hierGWAS",
      "engine": "utils::Sweave",
      "headings": [],
      "created": "2015-06-08 18:03:39",
      "modified": "2015-06-08 18:03:39",
      "commits": 1
    }
  ],
  "_score": 3.3010299956639813,
  "_indexed": true,
  "_nocasepkg": "hiergwas",
  "_universes": [
    "bioc"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.43.0",
      "date": "2026-05-30T08:03:05.000Z",
      "distro": "noble",
      "commit": "ff417c38bc2c855f4e323e88013dfe8166ea529c",
      "fileid": "9f2e48f6a6c0a164db2a4ccdb254734a10e6ca9587d593afa26dabc77cbfce2e",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678612075"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.43.0",
      "date": "2026-05-30T08:04:11.000Z",
      "distro": "noble",
      "commit": "ff417c38bc2c855f4e323e88013dfe8166ea529c",
      "fileid": "822af949aae809e733301b74607475dbc70638a6ba9c45d9572eb6657550e4e0",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678612075"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.43.0",
      "date": "2026-05-30T11:33:09.000Z",
      "commit": "ff417c38bc2c855f4e323e88013dfe8166ea529c",
      "fileid": "0e382ac371248970b0b797761ed8c2092c270bcf97870d0b00c04a204dd4bf52",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678612075"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.43.0",
      "date": "2026-05-30T11:32:54.000Z",
      "commit": "ff417c38bc2c855f4e323e88013dfe8166ea529c",
      "fileid": "ee2b0e002d116f347ccc20a6e6abcbeaae81df96c87d939a9dd4d71ddc40c074",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678612075"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.43.0",
      "date": "2026-05-30T08:02:03.000Z",
      "commit": "ff417c38bc2c855f4e323e88013dfe8166ea529c",
      "fileid": "012d2f63349ba78d4792174be726d2f78784fbfe114abcdbc1a7eb7f4cbd809a",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678612075"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.43.0",
      "date": "2026-05-30T08:01:39.000Z",
      "commit": "ff417c38bc2c855f4e323e88013dfe8166ea529c",
      "fileid": "dfdfcda509185c1bf4b967d4ef5d3877cf6fc5ebfad942c84281b9de938c04fa",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678612075"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.43.0",
      "date": "2026-05-30T08:01:23.000Z",
      "commit": "ff417c38bc2c855f4e323e88013dfe8166ea529c",
      "fileid": "de753140d98ac0398d909c662a1c676bdfdd26c954fb832585c2e0e771ac04c4",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678612075"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.43.0",
      "date": "2026-05-30T08:01:29.000Z",
      "commit": "ff417c38bc2c855f4e323e88013dfe8166ea529c",
      "fileid": "aede1117d4f3da83d28e6612989b69db7e34ab3657b2197d98f64674753848bd",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26678612075"
    }
  ]
}