{ "_id": "6a50f10089c83ec243a314f4", "Package": "gdsfmt", "Type": "Package", "Title": "R Interface to CoreArray Genomic Data Structure (GDS) Files", "Version": "1.49.5", "Date": "2026-07-09", "Author": "Xiuwen Zheng [aut, cre]\n(), Stephanie Gogarten\n[ctb], Jean-loup Gailly and Mark Adler [ctb] (for the included\nzlib sources), Yann Collet [ctb] (for the included LZ4\nsources), xz contributors [ctb] (for the included liblzma\nsources)", "Maintainer": "Xiuwen Zheng ", "Description": "Provides a high-level R interface to CoreArray Genomic\nData Structure (GDS) data files. GDS is portable across\nplatforms with hierarchical structure to store multiple\nscalable array-oriented data sets with metadata information. It\nis suited for large-scale datasets, especially for data which\nare much larger than the available random-access memory. The\ngdsfmt package offers the efficient operations specifically\ndesigned for integers of less than 8 bits, since a diploid\ngenotype, like single-nucleotide polymorphism (SNP), usually\noccupies fewer bits than a byte. Data compression and\ndecompression are available with relatively efficient random\naccess. It is also allowed to read a GDS file in parallel with\nmultiple R processes supported by the package parallel.", "License": "LGPL-3", "Copyright": "This package includes the sources of CoreArray C++ library\nwritten by Xiuwen Zheng (LGPL-3), zlib written by Jean-loup\nGailly and Mark Adler (zlib license), LZ4 written by Yann\nCollet (simplified BSD), and liblzma written by Lasse Collin\nand other xz contributors (public domain).", "VignetteBuilder": "knitr", "ByteCompile": "TRUE", "BugReports": "https://github.com/zhengxwen/gdsfmt/issues", "URL": "https://github.com/zhengxwen/gdsfmt", "biocViews": "Infrastructure, DataImport", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-07-10 06:19:03 UTC", "RemoteUrl": "https://github.com/bioc/gdsfmt", "RemoteRef": "HEAD", "RemoteSha": "58ca641d8d9abbebe515cfd4ac071469683c7325", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-07-10 13:06:08 UTC", "User": "root" }, "_user": "bioc", "_type": "src", "_file": 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