{ "_id": "6ac35210d743750d376da269", "Package": "ctdR", "Type": "Package", "Title": "Enrichment Analysis of Chemical-Gene Interactions from the\nComparative Toxicogenomics Database", "Version": "0.99.11", "Authors@R": "person(\ngiven = \"Luigi\",\nfamily = \"Corsaro\",\nrole = c(\"aut\", \"cre\"),\nemail = \"lcorsaro69@gmail.com\",\ncomment = c(ORCID = \"0000-0003-1218-230X\"))", "Description": "Identifies chemicals significantly associated with a set\nof genes using data from the Comparative Toxicogenomics\nDatabase (CTD, ). Supports four enrichment\nmethods through a unified interface: Over-Representation\nAnalysis (ORA) via a hypergeometric test on stats::phyper(),\nGene Set Enrichment Analysis (GSEA) via 'fgsea', the\ncompetitive gene-set test CAMERA via 'limma', and per-sample\nGene Set Variation Analysis (GSVA) via 'GSVA'. 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Users must\ndownload the required data files directly from\n and comply with the CTD data licensing\nterms (see ).", "License": "Apache License 2.0 | file LICENSE", "URL": "https://luigicorsaro.com/ctdR/, https://github.com/drake69/ctdR", "BugReports": "https://github.com/drake69/ctdR/issues", "Encoding": "UTF-8", "biocViews": "GeneSetEnrichment, Pathways, Annotation, GeneExpression,\nDataImport", "VignetteBuilder": "knitr", "Config/testthat/edition": "3", "Config/roxygen2/version": "8.0.0", "Config/pak/sysreqs": "libmagick++-dev gsfonts libicu-dev libpng-dev\nlibxml2-dev libssl-dev libx11-dev zlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-10-04 05:32:40 UTC", "RemoteUrl": "https://github.com/bioc/ctdR", "RemoteRef": "HEAD", "RemoteSha": "57961d56c89dda51cec7c8dcc4c91ed89f454aa2", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-05 07:22:14 UTC", "User": "root" }, "Author": "Luigi Corsaro [aut, cre] (ORCID:\n)", "Maintainer": "Luigi Corsaro 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