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  "Package": "cogeqc",
  "Title": "Systematic quality checks on comparative genomics analyses",
  "Version": "1.17.0",
  "Date": "2022-01-26",
  "Authors@R": "c(\nperson(given = \"Fabrício\",\nfamily = \"Almeida-Silva\",\nrole = c(\"aut\", \"cre\"),\nemail = \"fabricio_almeidasilva@hotmail.com\",\ncomment = c(ORCID = \"0000-0002-5314-2964\")),\nperson(given = \"Yves\",\nfamily = \"Van de Peer\",\nrole = \"aut\",\nemail = \"yves.vandepeer@psb.vib-ugent.be\",\ncomment = c(ORCID = \"0000-0003-4327-3730\"))\n)",
  "Description": "cogeqc aims to facilitate systematic quality checks on\nstandard comparative genomics analyses to help researchers\ndetect issues and select the most suitable parameters for each\ndata set. cogeqc can be used to asses: i. genome assembly and\nannotation quality with BUSCOs and comparisons of statistics\nwith publicly available genomes on the NCBI; ii. orthogroup\ninference using a protein domain-based approach and; iii.\nsynteny detection using synteny network properties. There are\nalso data visualization functions to explore QC summary\nstatistics.",
  "License": "GPL-3",
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  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:58:19 UTC",
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  "Author": "Fabrício Almeida-Silva [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-5314-2964>),\nYves Van de Peer [aut] (ORCID: <https://orcid.org/0000-0003-4327-3730>)",
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    {
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