{ "_id": "6ac8cf38de46216d5edd7a64", "Package": "clustSIGNAL", "Type": "Package", "Title": "ClustSIGNAL: a spatial clustering method", "Version": "1.5.2", "Authors@R": "c(\nperson(\"Pratibha\", \"Panwar\", email = \"pratibhapanwar.4@gmail.com\",\nrole = c(\"cre\", \"aut\", \"ctb\"), comment = c(ORCID = \"0000-0002-7437-7084\")),\nperson(\"Boyi\", \"Guo\", email = \"boyi.guo.work@gmail.com\", role = \"aut\"),\nperson(\"Haowen\", \"Zhao\", email = \"haowen.zhou19@gmail.com\", role = \"aut\"),\nperson(\"Stephanie\", \"Hicks\", email = \"shicks19@jhu.edu\", role = \"aut\"),\nperson(\"Shila\", \"Ghazanfar\", email = \"shazanfar@gmail.com\",\nrole = c(\"aut\", \"ctb\"), comment = c(ORCID = \"0000-0001-7861-6997\")))", "Description": "clustSIGNAL: clustering of Spatially Informed Gene\nexpression with Neighbourhood Adapted Learning. A tool for\nadaptively smoothing and clustering gene expression data.\nclustSIGNAL uses entropy to measure heterogeneity of cell\nneighbourhoods and performs a weighted, adaptive smoothing,\nwhere homogeneous neighbourhoods are smoothed more and\nheterogeneous neighbourhoods are smoothed less. This not only\novercomes data sparsity but also incorporates spatial context\ninto the gene expression data. The resulting smoothed gene\nexpression data is used for clustering and could be used for\nother downstream analyses.", "License": "GPL-2", "Encoding": "UTF-8", "URL": "https://sydneybiox.github.io/clustSIGNAL/", "BugReports": "https://github.com/sydneybiox/clustSIGNAL/issues", "biocViews": "Clustering, Software, GeneExpression, Spatial,\nTranscriptomics, SingleCell", "RoxygenNote": "7.3.3", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "libglpk-dev libmagick++-dev gsfonts libicu-dev\nlibxml2-dev libssl-dev zlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-09-09 03:28:01 UTC", "RemoteUrl": "https://github.com/bioc/clustSIGNAL", "RemoteRef": "HEAD", "RemoteSha": "a1fa57cfdc01f9b63f19f131489ba3e8578e112a", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-09 10:40:50 UTC", "User": "root" }, "Author": "Pratibha Panwar [cre, aut, ctb] (ORCID:\n),\nBoyi Guo [aut],\nHaowen Zhao [aut],\nStephanie Hicks [aut],\nShila Ghazanfar [aut, ctb] 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