{ "_id": "6a1f274ab401979e734225aa", "Package": "clustSIGNAL", "Type": "Package", "Title": "ClustSIGNAL: a spatial clustering method", "Version": "1.5.1", "Authors@R": "c(\nperson(\"Pratibha\", \"Panwar\", email = \"pratibhapanwar.4@gmail.com\",\nrole = c(\"cre\", \"aut\", \"ctb\"), comment = c(ORCID = \"0000-0002-7437-7084\")),\nperson(\"Boyi\", \"Guo\", email = \"boyi.guo.work@gmail.com\", role = \"aut\"),\nperson(\"Haowen\", \"Zhao\", email = \"haowen.zhou19@gmail.com\", role = \"aut\"),\nperson(\"Stephanie\", \"Hicks\", email = \"shicks19@jhu.edu\", role = \"aut\"),\nperson(\"Shila\", \"Ghazanfar\", email = \"shazanfar@gmail.com\",\nrole = c(\"aut\", \"ctb\"), comment = c(ORCID = \"0000-0001-7861-6997\")))", "Description": "clustSIGNAL: clustering of Spatially Informed Gene\nexpression with Neighbourhood Adapted Learning. A tool for\nadaptively smoothing and clustering gene expression data.\nclustSIGNAL uses entropy to measure heterogeneity of cell\nneighbourhoods and performs a weighted, adaptive smoothing,\nwhere homogeneous neighbourhoods are smoothed more and\nheterogeneous neighbourhoods are smoothed less. This not only\novercomes data sparsity but also incorporates spatial context\ninto the gene expression data. The resulting smoothed gene\nexpression data is used for clustering and could be used for\nother downstream analyses.", "License": "GPL-2", "Encoding": "UTF-8", "URL": "https://sydneybiox.github.io/clustSIGNAL/", "BugReports": "https://github.com/sydneybiox/clustSIGNAL/issues", "biocViews": "Clustering, Software, GeneExpression, Spatial,\nTranscriptomics, SingleCell", "RoxygenNote": "7.3.3", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "libcairo2-dev libfontconfig1-dev libfreetype6-dev\nlibfribidi-dev libglpk-dev libharfbuzz-dev libmagick++-dev\ngsfonts libicu-dev libjpeg-dev libpng-dev libtiff-dev\nlibwebp-dev libxml2-dev libssl-dev zlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-06-02 06:26:17 UTC", "RemoteUrl": "https://github.com/bioc/clustSIGNAL", "RemoteRef": "HEAD", "RemoteSha": "2e25b688a73ff0a5cc8c28114fccf237798629d3", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-02 18:47:13 UTC", "User": "root" }, "Author": "Pratibha Panwar [cre, aut, ctb] (ORCID:\n),\nBoyi Guo [aut],\nHaowen Zhao [aut],\nStephanie Hicks [aut],\nShila Ghazanfar [aut, ctb] (ORCID:\n)", "Maintainer": "Pratibha Panwar ", "MD5sum": "eecac8db64d72a016ab9e57e4b1f8ab0", "_user": "bioc", "_type": "src", "_file": "clustSIGNAL_1.5.1.tar.gz", "_fileid": "e5ed460bfa0e6a8f1388268c33e14d90e9b17d3ecb72b597d9425ceea6b1f924", "_filesize": 5190763, "_sha256": "e5ed460bfa0e6a8f1388268c33e14d90e9b17d3ecb72b597d9425ceea6b1f924", "_created": "2026-06-02T18:47:13.000Z", "_published": "2026-06-02T18:56:10.069Z", "_jobs": [ { "job": 79147449927, "time": 250, "config": "bioc-checks", "r": "4.6.0", "check": "NOTE", "artifact": "7366981091" }, { "job": 79147450091, "time": 372, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7367025864" }, { "job": 79147450064, "time": 369, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7367024652" }, { "job": 79147450024, "time": 282, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7367059934" }, { "job": 79147449983, "time": 244, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7367028852" }, { "job": 79146430383, "time": 324, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7366891733" }, { "job": 79147449936, "time": 180, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7366956423" }, { "job": 79147450042, "time": 306, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7367002553" }, { "job": 79147449969, "time": 278, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7366992029" }, { "job": 79147450014, "time": 245, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7366979768" } ], "_bioccheck": { "error": 0, "warning": 0, "note": 7 }, "_buildurl": "https://github.com/r-universe/bioc/actions/runs/26840600435", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/bioc/clustSIGNAL", "_commit": { "id": "2e25b688a73ff0a5cc8c28114fccf237798629d3", "author": "ppan0697 ", "committer": "ppan0697 ", "message": "Updated the package to improve method scaling. 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