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"Plotting", "Overview plot", "Building the overview plot", "Fusion reads plot", "Building the Fusion Reads Plot", "1. Aligning reads to the fusion sequence", "Load example fusion event", "Extracting fusion reads", "Extract the fusion junction sequence", "Map fusion reads to the fusion junction sequence", "Bowtie", "Rsubread", "A note on alignment performance", "Example .bam file for this example", "2. Import the alignment data into our fusion object", "3. Create the plot", "Fusion plot", "Building the fusion plot", "1. Load fusion data and find a fusion event", "2. Create an ensembldb object", "3. Coverage information from a .bam file", "Plotting the example fusion event", "Fusion transcripts plot", "Fusion transcript plot", "Fusion transcript plot with protein domain annotations", "Fusion transcript graph plot", "Reporting and filtering", "Working with Fusion objects", "The fusion report", "More information / where to get help", "Session Information" ], "created": "2016-12-12 22:17:22", "modified": "2019-03-17 10:33:06", "commits": 11 } ], "_score": 6.821513528404773, "_indexed": true, "_nocasepkg": "chimeraviz", "_universes": [ "bioc", "stianlagstad" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.39.0", "date": "2026-05-15T10:11:51.000Z", "distro": "noble", "commit": "24c40c6235374afd643bba9bb4cf49e299f1a0ee", "fileid": "62691116b3df2e5bc2ee303e776ef435d84a4df9ea049bca2ebc6c040c51d915", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25911895557" }, { "r": "4.6.0", "os": "linux", "version": "1.39.0", "date": "2026-05-15T10:12:23.000Z", "distro": "noble", "commit": "24c40c6235374afd643bba9bb4cf49e299f1a0ee", "fileid": "ffbb805d62baa3b5fd192dabf15dbc9e7e17f18a2f116c7cd8ca21c791b79844", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25911895557" }, { "r": "4.5.3", "os": "mac", "version": "1.39.0", "date": "2026-05-15T10:09:54.000Z", "commit": "24c40c6235374afd643bba9bb4cf49e299f1a0ee", "fileid": "63b94a67812e2c51055ac6e47af2f02402e38bfc8c37421a786b70c7e4d3cf2a", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25911895557" }, { "r": "4.6.0", "os": "mac", "version": "1.39.0", "date": "2026-05-15T10:10:26.000Z", "commit": "24c40c6235374afd643bba9bb4cf49e299f1a0ee", "fileid": "c10389e4a43adfb0fa87b631e09d3e3fdc25e1bb96a4569b418c25c81cd1b548", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25911895557" }, { "r": "4.7.0", "os": "win", "version": "1.39.0", "date": "2026-05-15T10:09:26.000Z", "commit": "24c40c6235374afd643bba9bb4cf49e299f1a0ee", "fileid": "2b7efca0597f4e31f40a92eeaeb9a5189a08fe030726d8703a51ec0240352af5", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25911895557" }, { "r": "4.5.3", "os": "win", "version": "1.39.0", "date": "2026-05-15T10:09:29.000Z", "commit": "24c40c6235374afd643bba9bb4cf49e299f1a0ee", "fileid": "460b2f14a4ee9994bc477c1a3dcb2a7e118b3153fdbd8fcedb59724a921bde7d", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25911895557" }, { "r": "4.6.0", "os": "win", "version": "1.39.0", "date": "2026-05-15T10:09:57.000Z", "commit": "24c40c6235374afd643bba9bb4cf49e299f1a0ee", "fileid": "178e54a3911fc78aaa5f399768e52df4596fa78b9e16aa6d2ba49ad312fe1e5c", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25911895557" }, { "r": "4.6.0", "os": "wasm", "version": "1.39.0", "date": "2026-06-02T19:16:32.000Z", "commit": "24c40c6235374afd643bba9bb4cf49e299f1a0ee", "fileid": "1a46ef7a111958869d56bd3a3655c900afd9033f419b1e60537fce7898a28423", "status": "success", "buildurl": "https://github.com/r-universe/bioc/actions/runs/25911895557" } ] }