{ "_id": "6a1be7991d7bb097a0a1b2ff", "Package": "cfdnakit", "Title": "Fragmen-length analysis package from high-throughput sequencing\nof cell-free DNA (cfDNA)", "Version": "1.11.0", "Authors@R": "person(given = \"Pitithat\",\nfamily = \"Puranachot\",\nrole = c(\"aut\", \"cre\"),\nemail = \"pitithat@gmail.com\",\ncomment = c(ORCID = \"0000-0002-6786-9240\"))", "Description": "This package provides basic functions for analyzing\nshallow whole-genome sequencing (~0.3X or more) of cell-free\nDNA (cfDNA). The package basically extracts the length of cfDNA\nfragments and aids the vistualization of fragment-length\ninformation. The package also extract fragment-length\ninformation per non-overlapping fixed-sized bins and used it\nfor calculating ctDNA estimation score (CES).", "License": "GPL-3", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.2.3", "biocViews": "CopyNumberVariation, Sequencing, WholeGenome", "BugReports": "https://github.com/Pitithat-pu/cfdnakit/issues", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "libbz2-dev liblzma-dev libssl-dev xz-utils\nzlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 13:01:05 UTC", "RemoteUrl": "https://github.com/bioc/cfdnakit", "RemoteRef": "HEAD", "RemoteSha": "bfe08ee281565981aad63ea4c467f7281e6fdce2", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-31 06:42:32 UTC", "User": "root" }, "Author": "Pitithat Puranachot [aut, cre] (ORCID:\n)", "Maintainer": "Pitithat Puranachot ", "MD5sum": "ce323a142565daff72f1cb79b6e5261a", "_user": "bioc", "_type": "src", "_file": 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