{ "_id": "6a1adea51d7bb097a09ebd56", "Package": "cfDNAPro", "Type": "Package", "Title": "cfDNAPro extracts and Visualises biological features from whole\ngenome sequencing data of cell-free DNA", "Version": "1.19.0", "biocViews": "Visualization, Sequencing, WholeGenome", "Authors@R": "c(\nperson(\"Haichao\",\"Wang\", email=\"hw538@cam.ac.uk\", role =c(\"aut\",\"cre\")),\nperson(\"Hui\",\"Zhao\", email=\"hui.zhao@cruk.cam.ac.uk\", role =c(\"ctb\")),\nperson(\"Elkie\",\"Chan\", email=\"elkie.chan@cruk.cam.ac.uk\", role =c(\"ctb\")),\nperson(\"Christopher\", \"Smith\", email=\"christopher.smith@cruk.cam.ac.uk\", role = c(\"ctb\")),\nperson(\"Tomer\", \"Kaplan\", email=\"tomer.kaplan@cruk.cam.ac.uk\", role = c(\"ctb\")),\nperson(\"Florian\", \"Markowetz\", email=\"florian.markowetz@cruk.cam.ac.uk\", role = c(\"ctb\")),\nperson(\"Nitzan\",\"Rosenfeld\", email=\"nitzan.rosenfeld@cruk.cam.ac.uk\", role =c(\"ctb\")))", "Description": "cfDNA fragments carry important features for building\ncancer sample classification ML models, such as fragment size,\nand fragment end motif etc. Analyzing and visualizing fragment\nsize metrics, as well as other biological features in a\ncurated, standardized, scalable, well-documented, and\nreproducible way might be time intensive. This package intends\nto resolve these problems and simplify the process. It offers\ntwo sets of functions for cfDNA feature characterization and\nvisualization.", "License": "GPL-3", "Encoding": "UTF-8", "RoxygenNote": "7.2.2", "VignetteBuilder": "knitr", "URL": "https://github.com/hw538/cfDNAPro", "BugRePORTS": "https://github.com/hw538/cfDNAPro/issues", "BiocType": "Software", "Config/pak/sysreqs": "make libbz2-dev libicu-dev liblzma-dev libxml2-dev\nlibssl-dev xz-utils zlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:56:37 UTC", "RemoteUrl": "https://github.com/bioc/cfDNAPro", "RemoteRef": "HEAD", "RemoteSha": "22293997430a0aa6e74cf1f32e7b65468df703c5", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-30 09:15:23 UTC", "User": "root" }, "Author": "Haichao Wang [aut, cre],\nHui Zhao [ctb],\nElkie Chan [ctb],\nChristopher Smith [ctb],\nTomer Kaplan [ctb],\nFlorian Markowetz [ctb],\nNitzan Rosenfeld [ctb]", "Maintainer": "Haichao Wang ", "MD5sum": "73652ca2c39db9f77828dbe012642532", "_user": "bioc", 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