{
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  "Package": "biocthis",
  "Title": "Automate package and project setup for Bioconductor packages",
  "Version": "1.23.0",
  "Date": "2025-03-18",
  "Authors@R": "c(\nperson(\"Leonardo\", \"Collado-Torres\", role = c(\"aut\", \"cre\"),\nemail = \"lcolladotor@gmail.com\", comment = c(ORCID = \"0000-0003-2140-308X\")),\nperson(\"Marcel\", \"Ramos\", email = \"marcel.ramos@roswellpark.org\",\nrole = c(\"ctb\"), comment = c(ORCID = \"0000-0002-3242-0582\"))\n)",
  "Description": "This package expands the usethis package with the goal of\nhelping automate the process of creating R packages for\nBioconductor or making them Bioconductor-friendly.",
  "License": "Artistic-2.0",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.2",
  "URL": "https://github.com/lcolladotor/biocthis",
  "BugReports": "https://github.com/lcolladotor/biocthis/issues",
  "biocViews": "Software, ReportWriting",
  "VignetteBuilder": "knitr",
  "Config/pak/sysreqs": "cmake git make libgit2-dev libuv1-dev libssl-dev\nlibx11-dev",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:54:04 UTC",
  "RemoteUrl": "https://github.com/bioc/biocthis",
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    "User": "root"
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  "Author": "Leonardo Collado-Torres [aut, cre] (ORCID:\n<https://orcid.org/0000-0003-2140-308X>),\nMarcel Ramos [ctb] (ORCID: <https://orcid.org/0000-0002-3242-0582>)",
  "Maintainer": "Leonardo Collado-Torres <lcolladotor@gmail.com>",
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  "_created": "2026-10-06T09:02:27.000Z",
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    "warning": 3,
    "note": 9
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  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/37439805129",
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    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
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    "email": "lcolladotor@gmail.com",
    "login": "lcolladotor",
    "bluesky": "@lcolladotor.bsky.social",
    "linkedin": "in/lcollado",
    "twitter": "@lcolladotor",
    "description": "Find more information about myself at my website where I post my recent publications, talks, blog posts and other updates.",
    "uuid": 2288213,
    "orcid": "0000-0003-2140-308X"
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    "description": "Software for the analysis and comprehension of high-throughput genomic data"
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    "extra/contents.json",
    "extra/manual.pdf",
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    "extra/NEWS.txt",
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    "extra/readme.md"
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  "_cranurl": false,
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    "use_bioc_badges",
    "use_bioc_build_badge",
    "use_bioc_citation",
    "use_bioc_coc",
    "use_bioc_dependencies_badge",
    "use_bioc_description",
    "use_bioc_feature_request_template",
    "use_bioc_github_action",
    "use_bioc_history_badge",
    "use_bioc_issue_template",
    "use_bioc_last_commit_badge",
    "use_bioc_news_md",
    "use_bioc_pkg_templates",
    "use_bioc_pkgdown_css",
    "use_bioc_rank_badge",
    "use_bioc_readme_rmd",
    "use_bioc_support",
    "use_bioc_support_badge",
    "use_bioc_vignette",
    "use_tiny_test",
    "use_tinytest"
  ],
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      "title": "Add Bioconductor README badges",
      "topics": [
        "bioc_badges",
        "use_bioc_badges",
        "use_bioc_build_badge",
        "use_bioc_dependencies_badge",
        "use_bioc_history_badge",
        "use_bioc_last_commit_badge",
        "use_bioc_rank_badge",
        "use_bioc_support_badge"
      ]
    },
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      "title": "Tidyverse style made Bioconductor-friendly",
      "topics": [
        "bioc_style"
      ]
    },
    {
      "page": "biocthis_example_pkg",
      "title": "Create a temporary example package",
      "topics": [
        "biocthis_example_pkg"
      ]
    },
    {
      "page": "use_bioc_citation",
      "title": "Create a biocthis-style CITATION template",
      "topics": [
        "use_bioc_citation"
      ]
    },
    {
      "page": "use_bioc_coc",
      "title": "Create a Bioconductor-styled code of conduct",
      "topics": [
        "use_bioc_coc"
      ]
    },
    {
      "page": "use_bioc_description",
      "title": "Create a biocthis-style DESCRIPTION template",
      "topics": [
        "use_bioc_description"
      ]
    },
    {
      "page": "use_bioc_feature_request_template",
      "title": "Create a biocthis-style GitHub feature request template",
      "topics": [
        "use_bioc_feature_request_template"
      ]
    },
    {
      "page": "use_bioc_github_action",
      "title": "Create a biocthis-style GitHub Actions workflow",
      "topics": [
        "use_bioc_github_action"
      ]
    },
    {
      "page": "use_bioc_issue_template",
      "title": "Create a biocthis-style GitHub issue template",
      "topics": [
        "use_bioc_issue_template"
      ]
    },
    {
      "page": "use_bioc_news_md",
      "title": "Create a biocthis-style NEWS.md file",
      "topics": [
        "use_bioc_news_md"
      ]
    },
    {
      "page": "use_bioc_pkg_templates",
      "title": "Create a biocthis package template R scripts",
      "topics": [
        "use_bioc_pkg_templates"
      ]
    },
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      "title": "Create a css with Bioconductor colors for pkgdown",
      "topics": [
        "use_bioc_pkgdown_css"
      ]
    },
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      "title": "Create a biocthis-style README.Rmd file",
      "topics": [
        "use_bioc_readme_rmd"
      ]
    },
    {
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      "title": "Create a biocthis-style GitHub support file",
      "topics": [
        "use_bioc_support"
      ]
    },
    {
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      "title": "Create a biocthis-style vignette template",
      "topics": [
        "use_bioc_vignette"
      ]
    },
    {
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      "title": "Use the 'tinytest' framework for unit tests",
      "topics": [
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        "use_tiny_test"
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        "Backstory",
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        "GitHub Actions",
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        "biocthis functions overview",
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        "use_bioc_github_action()",
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        "Bibliography"
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