{ "_id": "6a1aded61d7bb097a09ebe46", "Package": "asuri", "Date": "2024-04-03", "Type": "Package", "Title": "Analysis of SUrvival and RIsk prediction in patients based on\ngene signatures", "Version": "1.1.0", "Description": "The asuri (Analysis of SUrvival and patients RIsk\nprediction based on gene signatures) package discovers marker\ngenes that are related to risk prediction capabilities and to a\nclinical variable of interest. It uses two main steps,\nincluding subsampling glmnet and unicox. The package implements\nrobust functions to discover survival markers related to a\nclinical phenotype and to predict a risk score, allowing to\nstudy the patient's risk based on the gene signatures. Several\nplots are provided to visualise the relevance of the genes, the\nrisk score, and patient stratification, as well as a robust\nversion of the Kaplan-Meier curves.", "Authors@R": "c(\nperson(given = \"Alberto\",\nfamily = \"Berral-Gonzalez\",\nemail = \"aberralgonzalez@gmail.com\",\nrole = c(\"aut\", \"cre\", \"ctb\"),\ncomment = c(ORCID = \"0000-0001-8388-6051\")),\nperson(given = \"María\",\nfamily = \"Sanchez-Martin\",\nemail = \"msanmar@usal.es\",\nrole = c(\"aut\", \"ctb\"),\ncomment = c(ORCID = \"0009-0006-5549-6113\")),\nperson(given = \"Santiago\",\nfamily = \"Bueno-Fortes\",\nrole = c(\"aut\", \"ctb\"),\ncomment = c(ORCID = \"0000-0001-7141-2860\")),\nperson(given = \"Natalia\",\nfamily = \"Alonso-Moreda\",\nrole = c(\"aut\", \"ctb\"),\ncomment = c(ORCID = \"0000-0002-2347-5127\")),\nperson(given = \"Jose Manuel\",\nfamily = \"Sanchez-Santos\",\nrole = c(\"aut\", \"ctb\"),\ncomment = c(ORCID = \"0000-0002-7434-7598\")),\nperson(given = \"Manuel\",\nfamily = \"Martin-Merino Acera\",\nrole = c(\"aut\", \"ctb\"),\ncomment = c(ORCID = \"0000-0002-5914-2332\")),\nperson(given = \"Javier\",\nfamily = \"De Las Rivas\",\nemail = \"jrivas@usal.es\",\nrole = c(\"aut\", \"ctb\"),\ncomment = c(ORCID = \"0000-0002-0984-9946\"))\n)", "License": "LGPL-3 + file LICENSE", "biocViews": "Software, StatisticalMethod, WorkflowStep, GeneExpression,\nMicroarray, DifferentialExpression, GenePrediction, Regression,\nSurvival, ExonArray, MultipleComparison", "URL": "https://github.com/jdelasrivas-lab/asuri", "BugReports": "https://github.com/jdelasrivas-lab/asuri/issues", "BiocType": "Software", "ZipData": "TRUE", "RoxygenNote": "7.3.3", "NeedsCompilation": "no", "RdMacros": "Rdpack", "Encoding": "UTF-8", "VignetteBuilder": "knitr", "LazyData": "false", "Config/pak/sysreqs": "libicu-dev libssl-dev zlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-29 09:38:45 UTC", "RemoteUrl": "https://github.com/bioc/asuri", "RemoteRef": "HEAD", "RemoteSha": "dfe8e2e9b229ff3540d19c28ed0b5e9e5e95bc31", "Packaged": { "Date": "2026-05-30 09:15:34 UTC", "User": "root" }, "Author": "Alberto Berral-Gonzalez [aut, cre, ctb] (ORCID:\n),\nMaría Sanchez-Martin [aut, ctb] (ORCID:\n),\nSantiago Bueno-Fortes [aut, ctb] (ORCID:\n),\nNatalia Alonso-Moreda [aut, ctb] (ORCID:\n),\nJose Manuel Sanchez-Santos [aut, ctb] (ORCID:\n),\nManuel Martin-Merino Acera [aut, ctb] (ORCID:\n),\nJavier De Las Rivas [aut, ctb] (ORCID:\n)", "Maintainer": "Alberto Berral-Gonzalez ", "MD5sum": "f3b896fe020ba0313680de5a57b99518", "_user": "bioc", "_type": "src", "_file": "asuri_1.1.0.tar.gz", "_fileid": "d1e133b5194604509ee079f22514a190ce19a38a01ff0fede2845ca52f04b1ef", "_filesize": 4003044, "_sha256": "d1e133b5194604509ee079f22514a190ce19a38a01ff0fede2845ca52f04b1ef", "_created": "2026-05-30T09:15:34.000Z", "_published": "2026-05-30T12:57:58.098Z", "_jobs": [ { "job": 78639054177, "time": 208, "config": "bioc-checks", "r": "4.6.0", "check": "NOTE", 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