{
  "_id": "6a49f8a59a7b00bcc12f4b10",
  "Package": "agilp",
  "Type": "Package",
  "Title": "Agilent expression array processing package",
  "Version": "3.45.0",
  "Date": "2012-06-10",
  "Author": "Benny Chain <b.chain@ucl.ac.uk>",
  "Maintainer": "Benny Chain <b.chain@ucl.ac.uk>",
  "Description": "More about what it does (maybe more than one line)",
  "License": "GPL-3",
  "Packaged": {
    "Date": "2026-07-05 06:06:45 UTC",
    "User": "root"
  },
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:36:56 UTC",
  "RemoteUrl": "https://github.com/bioc/agilp",
  "RemoteRef": "HEAD",
  "RemoteSha": "a161e370fa4bdf336e54838c31c5eecf72d20956",
  "NeedsCompilation": "no",
  "_user": "bioc",
  "_type": "src",
  "_file": "agilp_3.45.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/77a29fad52d06bed204899dc8a214bc416739d2c66742ffb56ad171484085632",
  "_filesize": 479497,
  "_sha256": "77a29fad52d06bed204899dc8a214bc416739d2c66742ffb56ad171484085632",
  "_expires": "2026-10-13T06:24:35.000Z",
  "_created": "2026-07-05T06:06:45.000Z",
  "_published": "2026-07-05T06:24:37.315Z",
  "_bioccheck": {
    "error": 2,
    "warning": 3,
    "note": 14
  },
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/28731467791",
  "_status": "success",
  "_upstream": "https://github.com/bioc/agilp",
  "_commit": {
    "id": "a161e370fa4bdf336e54838c31c5eecf72d20956",
    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777379816
  },
  "_maintainer": {
    "name": "Benny Chain",
    "email": "b.chain@ucl.ac.uk",
    "login": "bchain",
    "description": "",
    "uuid": 5867751
  },
  "_distro": "resolute",
  "_jobs": [
    {
      "job": 85197920825,
      "time": 125,
      "config": "bioc-checks",
      "r": "4.6.1",
      "check": "ERROR",
      "artifact": "8088899063"
    },
    {
      "job": 85197920862,
      "time": 164,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "8088904209"
    },
    {
      "job": 85197920824,
      "time": 126,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8088899229"
    },
    {
      "job": 85197920821,
      "time": 92,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "8089012938"
    },
    {
      "job": 85197920818,
      "time": 62,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8089011725"
    },
    {
      "job": 85197770077,
      "time": 138,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8088882342"
    },
    {
      "job": 85197920794,
      "time": 92,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8088894656"
    },
    {
      "job": 85197920813,
      "time": 67,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "8088891523"
    },
    {
      "job": 85197920829,
      "time": 56,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "8088889957"
    },
    {
      "job": 85197920828,
      "time": 59,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8088890268"
    }
  ],
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 2.14.0",
      "role": "Depends"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "3.45.0",
      "bioc": "3.24"
    },
    {
      "branch": "release",
      "version": "3.44.0",
      "bioc": "3.23"
    }
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 445,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_mentions": 3,
  "_searchresults": 4,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/agilp.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "manual.pdf"
  ],
  "_realowner": "bioc",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0",
      "date": "2010-03-15"
    }
  ],
  "_exports": [
    "AALoess",
    "AAProcess",
    "Baseline",
    "Equaliser",
    "filenamex",
    "IDswop",
    "Loader"
  ],
  "_help": [
    {
      "page": "AALoess",
      "title": "Normalises a set of gene expression data files using LOESS",
      "topics": [
        "AALoess"
      ]
    },
    {
      "page": "AAProcess",
      "title": "Extracts raw expression data from Agilent expression array scanner files.",
      "topics": [
        "AAProcess"
      ]
    },
    {
      "page": "Baseline",
      "title": "Constructs a file with the mean of each probe from a set of raw expression array data files",
      "topics": [
        "Baseline"
      ]
    },
    {
      "page": "Equaliser",
      "title": "Trims a set of gene expression data files to include only the set of identifiers common to all files",
      "topics": [
        "Equaliser"
      ]
    },
    {
      "page": "filenamex",
      "title": "A file name listing utility",
      "topics": [
        "filenamex"
      ]
    },
    {
      "page": "IDswop",
      "title": "Mapping expression data across bioinformatic identifiers",
      "topics": [
        "IDswop"
      ]
    },
    {
      "page": "Loader",
      "title": "A file choser utility file.",
      "topics": [
        "Loader"
      ]
    }
  ],
  "_rundeps": [],
  "_vignettes": [
    {
      "source": "agilp_manual.Rnw",
      "filename": "agilp_manual.pdf",
      "title": "An R Package for processing expression microarray data",
      "engine": "utils::Sweave",
      "headings": [],
      "created": "2013-11-01 20:27:10",
      "modified": "2015-01-06 15:07:05",
      "commits": 3
    }
  ],
  "_score": 3.778151250383644,
  "_indexed": true,
  "_nocasepkg": "agilp",
  "_universes": [
    "bioc",
    "bchain"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "3.45.0",
      "date": "2026-07-05T06:09:32.000Z",
      "distro": "resolute",
      "commit": "a161e370fa4bdf336e54838c31c5eecf72d20956",
      "fileid": "https://r2.ropensci.org/0c5e8c3c0713a2bd6563a45baf9cb944b3e789ec4abbccd38c97d621bf1678b9",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28731467791"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "3.45.0",
      "date": "2026-07-05T06:08:55.000Z",
      "distro": "resolute",
      "commit": "a161e370fa4bdf336e54838c31c5eecf72d20956",
      "fileid": "https://r2.ropensci.org/f89aa29f2501a56dcf3149c36a53e6f0feac7a3320e703ba6752608b293e312f",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28731467791"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "3.45.0",
      "date": "2026-07-05T06:24:04.000Z",
      "commit": "a161e370fa4bdf336e54838c31c5eecf72d20956",
      "fileid": "https://r2.ropensci.org/7c45c201dacc6545d9f0f795ac2ba69ce334f6c4098ef898df78fbb9e6120f79",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28731467791"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "3.45.0",
      "date": "2026-07-05T06:23:55.000Z",
      "commit": "a161e370fa4bdf336e54838c31c5eecf72d20956",
      "fileid": "https://r2.ropensci.org/3ed6181f85ec378bc58302317c91038e394ce564e1fb1f11cd55cf44c6d6352d",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28731467791"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "3.45.0",
      "date": "2026-07-05T06:08:29.000Z",
      "commit": "a161e370fa4bdf336e54838c31c5eecf72d20956",
      "fileid": "https://r2.ropensci.org/1d753f06bf4046b92f672045394a353518a08bb38bbf66ae7c6d619cd6504a04",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28731467791"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "3.45.0",
      "date": "2026-07-05T06:07:52.000Z",
      "commit": "a161e370fa4bdf336e54838c31c5eecf72d20956",
      "fileid": "https://r2.ropensci.org/d2d58de28a72dabb3053335d20ba49a75ca8c4307641f88c85fbff7cfc2ddc43",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28731467791"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "3.45.0",
      "date": "2026-07-05T06:07:40.000Z",
      "commit": "a161e370fa4bdf336e54838c31c5eecf72d20956",
      "fileid": "https://r2.ropensci.org/2a02e2106a2ace252ff77c27bf937a6e135c3a6c2779ee3d16008c9b42660b93",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28731467791"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "3.45.0",
      "date": "2026-07-05T06:07:42.000Z",
      "commit": "a161e370fa4bdf336e54838c31c5eecf72d20956",
      "fileid": "https://r2.ropensci.org/2e4fb814403a7257acdf86b58c5f05d7790516f723e86a841482e890c3a6c32c",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28731467791"
    }
  ]
}