{
  "_id": "6a196fcdacfb0bcc41decd9e",
  "Package": "affyContam",
  "Title": "structured corruption of affymetrix cel file data",
  "Version": "1.71.0",
  "Author": "V. Carey",
  "Description": "structured corruption of cel file data to demonstrate QA\neffectiveness",
  "Maintainer": "V. Carey <stvjc@channing.harvard.edu>",
  "License": "Artistic-2.0",
  "LazyLoad": "yes",
  "biocViews": "Infrastructure",
  "Config/pak/sysreqs": "zlib1g-dev",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:33:29 UTC",
  "RemoteUrl": "https://github.com/bioc/affyContam",
  "RemoteRef": "HEAD",
  "RemoteSha": "108ab4154e179ff046f6872c15e095fb8c4ec403",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-29 08:48:44 UTC",
    "User": "root"
  },
  "MD5sum": "0c9b775ce7d0b12ff85d4a691fa99e84",
  "_user": "bioc",
  "_type": "src",
  "_file": "affyContam_1.71.0.tar.gz",
  "_fileid": "c82da13a563de3625f477a25da729506131831c4b21fec4bae312bb0399eaadc",
  "_filesize": 507299,
  "_sha256": "c82da13a563de3625f477a25da729506131831c4b21fec4bae312bb0399eaadc",
  "_created": "2026-05-29T08:48:44.000Z",
  "_published": "2026-05-29T10:51:57.408Z",
  "_jobs": [
    {
      "job": 78468573625,
      "time": 157,
      "config": "bioc-checks",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "7286834827"
    },
    {
      "job": 78468573694,
      "time": 165,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7286837101"
    },
    {
      "job": 78468573705,
      "time": 353,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7286895548"
    },
    {
      "job": 78468573671,
      "time": 112,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7288954522"
    },
    {
      "job": 78468573716,
      "time": 156,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7288966869"
    },
    {
      "job": 78468094477,
      "time": 181,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7286786389"
    },
    {
      "job": 78468573616,
      "time": 113,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7286821227"
    },
    {
      "job": 78468573702,
      "time": 452,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7286925894"
    },
    {
      "job": 78468573678,
      "time": 464,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7286932845"
    },
    {
      "job": 78468573711,
      "time": 461,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7286929141"
    }
  ],
  "_bioccheck": {
    "error": 2,
    "warning": 3,
    "note": 9
  },
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/26627599555",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/bioc/affyContam",
  "_commit": {
    "id": "108ab4154e179ff046f6872c15e095fb8c4ec403",
    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777379609
  },
  "_maintainer": {
    "name": "V. Carey",
    "email": "stvjc@channing.harvard.edu",
    "login": "vjcitn",
    "description": "Professor of Medicine, Channing Division of Network Medicine, Mass General Brigham, Harvard Medical School.",
    "uuid": 4624066
  },
  "_distro": "noble",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 2.7.0",
      "role": "Depends"
    },
    {
      "package": "tools",
      "role": "Depends"
    },
    {
      "package": "methods",
      "role": "Depends"
    },
    {
      "package": "utils",
      "role": "Depends"
    },
    {
      "package": "Biobase",
      "role": "Depends"
    },
    {
      "package": "affy",
      "role": "Depends"
    },
    {
      "package": "affydata",
      "role": "Depends"
    },
    {
      "package": "hgu95av2cdf",
      "role": "Suggests"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 1,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.71.0",
      "bioc": "3.24"
    },
    {
      "branch": "release",
      "version": "1.70.0",
      "bioc": "3.23"
    }
  ],
  "_topics": [
    "infrastructure"
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_downloads": {
    "count": 533,
    "source": "https://www.bioconductor.org/packages/stats/bioc/affyContam"
  },
  "_searchresults": 4,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/affyContam.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "manual.pdf"
  ],
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
    "getCircRegion",
    "getRectRegion",
    "setCircRegion",
    "setRectRegion"
  ],
  "_help": [
    {
      "page": "setRectRegion",
      "title": "set a rectangular or circular region in an affybatch to a specified set of values",
      "topics": [
        "getCircRegion",
        "getRectRegion",
        "setCircRegion",
        "setRectRegion"
      ]
    }
  ],
  "_rundeps": [
    "affy",
    "affydata",
    "affyio",
    "Biobase",
    "BiocGenerics",
    "BiocManager",
    "generics",
    "preprocessCore"
  ],
  "_vignettes": [
    {
      "source": "affyContam.Rnw",
      "filename": "affyContam.pdf",
      "title": "affy contamination tools",
      "engine": "utils::Sweave",
      "headings": [],
      "created": "2013-11-01 20:06:03",
      "modified": "2019-12-23 23:03:40",
      "commits": 2
    }
  ],
  "_score": 3.778151250383644,
  "_indexed": true,
  "_nocasepkg": "affycontam",
  "_universes": [
    "bioc",
    "vjcitn"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.71.0",
      "date": "2026-05-29T08:51:17.000Z",
      "distro": "noble",
      "commit": "108ab4154e179ff046f6872c15e095fb8c4ec403",
      "fileid": "be42a54d8a5a0403ae55b46d34ed085f169b6e99df739883a3be1186afa16d6b",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26627599555"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.71.0",
      "date": "2026-05-29T08:54:28.000Z",
      "distro": "noble",
      "commit": "108ab4154e179ff046f6872c15e095fb8c4ec403",
      "fileid": "fb6e15dbcf096b7177a444f588ceb5d0a57ead2ebc00ec7bb0ceebc474087444",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26627599555"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.71.0",
      "date": "2026-05-29T10:50:39.000Z",
      "commit": "108ab4154e179ff046f6872c15e095fb8c4ec403",
      "fileid": "55d58caa00286b4c299eb4d81d82aab1c9ea8ebdc1c02f9fe548ee181cf770ba",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26627599555"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.71.0",
      "date": "2026-05-29T10:51:12.000Z",
      "commit": "108ab4154e179ff046f6872c15e095fb8c4ec403",
      "fileid": "ca2d2df9c8899808009d84363300f482753b23aee95d63ec8053debc6534d858",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26627599555"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.71.0",
      "date": "2026-05-29T08:50:50.000Z",
      "commit": "108ab4154e179ff046f6872c15e095fb8c4ec403",
      "fileid": "220be311b22841186cc03a88acf833ea121c0c8a51a59beb9741e9bacb583a62",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26627599555"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.71.0",
      "date": "2026-05-29T08:55:58.000Z",
      "commit": "108ab4154e179ff046f6872c15e095fb8c4ec403",
      "fileid": "08a158f67f5397cdd85a59b4e06197d1c16457f9bf5ad9fb243088811d3ab828",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26627599555"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.71.0",
      "date": "2026-05-29T08:56:20.000Z",
      "commit": "108ab4154e179ff046f6872c15e095fb8c4ec403",
      "fileid": "9c0edbb271a5c9386e65099eeb580929bb56ad2216d0bd58482f78dcaf83ff61",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26627599555"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.71.0",
      "date": "2026-05-29T08:56:10.000Z",
      "commit": "108ab4154e179ff046f6872c15e095fb8c4ec403",
      "fileid": "e8b7fb5889f5e35a3ea0fd789b443928ce735ac630b726834b0505d8fc64a9d6",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/26627599555"
    }
  ]
}