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"normalize.loess" ] }, { "page": "normalize.qspline", "title": "Normalize arrays", "topics": [ "normalize.AffyBatch.qspline", "normalize.qspline", "qspline-normalize" ] }, { "page": "normalize.quantiles", "title": "Quantile Normalization", "topics": [ "normalize.AffyBatch.quantiles" ] }, { "page": "normalize.quantiles.robust", "title": "Robust Quantile Normalization", "topics": [ "normalize.AffyBatch.quantiles.robust" ] }, { "page": "pairs.AffyBatch", "title": "plot intensities using 'pairs'", "topics": [ "pairs.AffyBatch" ] }, { "page": "plot.ProbeSet", "title": "plot a probe set", "topics": [ "plot.ProbeSet" ] }, { "page": "plot.density", "title": "Plot Densities", "topics": [ "plotDensity", "plotDensity.AffyBatch" ] }, { "page": "plotLocation", "title": "Plot a location on a cel image", "topics": [ "plotLocation" ] }, { "page": "pmcorrect", "title": "PM Correction", "topics": [ "pmcorrect", "pmcorrect.mas", "pmcorrect.pmonly", "pmcorrect.subtractmm" ] }, { "page": "ppsetApply", 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